Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0222 ATGGAAGGGAATATAGAAGGAAACAATAATAATAAAGTAGGGTTAGAGAAGAAGGCAAGGCCACAAGAACAACGGAATTGTCCAAGGTGCAATTCTACAAACACCAAGTTCTGCTACTACAACAATTATAGCCTCACACAACCAAGATACTTCTGCAAAACTTGCAGAAGGTACTGGACTGAAGGTGGGTCCCTCAGGAATGTCCCTGTTGGAGGAGGTTCCAGAAAGAACAAGAAGCTCATCACAACTACTAATCCTTCATCTTCATCATCAAAGATTCTTCCTGAATTAAATCCACCATCAACTTCTTCTGTTCCTTCTTCTTCTTCTTCTCAGAACCCTAAAATGTTAATGCAAGGAGGTCAAGATCTTAATCTGTCTTTCCCACCTATTATGGGGAATTATGACCACCATCATGGGCTTAGTTATCAAAGCTCTTCGTCTTCTTCAACTTCTTCTTCTTCTACTACTTCTGCTTTGATGCTACTGAGAGCAGGCATGGCTTCTAATAATCATCATCACCCTTTTGTTCATAATCCGATACTGATGCAAAACTCATCAAATAATGCGCTTTTCCCAGCTCCTTCTGGGTTTAATCCGATGCATGATGTTAAGCCAGCAAGCCTTGGATTTTCAGTGGATGATCATCATCATCAAGGGCTTCGAAGCAGATTTGGTGTTCATCAAGAGAATGATAATATTAATGCTGGTGGAAGCAGGTTATTGTTTCCTTTTGGAGATGTCAAGCAGATTCCAGGAGCTCATCATGAAGTTGAAGAAAATAATAAAGAACATGCTGGGAATTCAGCTTCTGGGTATTGGACTGGAATGATTGGTGAAGGATCCTGGTAA 852 0.4049 MEGNIEGNNNNKVGLEKKARPQEQRNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKKLITTTNPSSSSSKILPELNPPSTSSVPSSSSSQNPKMLMQGGQDLNLSFPPIMGNYDHHHGLSYQSSSSSSTSSSSTTSALMLLRAGMASNNHHHPFVHNPILMQNSSNNALFPAPSGFNPMHDVKPASLGFSVDDHHHQGLRSRFGVHQENDNINAGGSRLLFPFGDVKQIPGAHHEVEENNKEHAGNSASGYWTGMIGEGSW 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0222 283 ProSitePatterns Zinc finger Dof-type signature. 27 63 IPR003851 GO:0003677|GO:0006355
Lele43g0222 283 Pfam Dof domain, zinc finger 23 79 IPR003851 GO:0003677|GO:0006355
Lele43g0222 283 MobiDBLite consensus disorder prediction 66 123 - -
Lele43g0222 283 MobiDBLite consensus disorder prediction 77 120 - -
Lele43g0222 283 MobiDBLite consensus disorder prediction 1 27 - -
Lele43g0222 283 ProSiteProfiles Zinc finger Dof-type profile. 25 79 IPR003851 GO:0003677|GO:0006355
Lele43g0222 283 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 16 168 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0222 Lele-ChrLele43 2023816 2024667 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0222 17 283 C2C2-Dof Transcription Factor Family AT3G61850 46.503 3.48e-61 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lele43g0222 zf-Dof 8.2e-33 No_clan