Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g1121 ATGGAAGGGAATATAGAAGGAAACAATAATAATAAAGTAGGGTTAGAGAAGACGGCAAGGCCACAAGAACAACTGAATTGTCCAAGGTGCAATTCTACAAACACCAAGTTCTGCTACTACAACAATTATAGCCTCACACAGCCCAGATACTTCTGCAAAACTTGCAGAAGGTACTGGACTGAAGGTGGGTCCCTCAGGAATGTCCCTGTTGGAGGAGGTTCCAGAAAGAACAAGAAGCTCATCCCTACAACTAATTCTTCATCTTCATCAAAGCTTCTTCCCGACTTGAATCCACCATCAACTCCTGTTCCTTCTAATTATTCTTCTTCTCAGAACCCCAAAATGTTAATGCAAGGAGGCCAAGATCTTAATCTGGCTTTCCCACCTATTATGGAGAATTATGACCATCATCATGGGCTTAGTTATCAAAGCTCTTCGTCTTCTTCTTCTACTTCTGCTTTGATGCTTCTAAGAGCAGGCATGGCTTCTAATAATCATCATCATCCTTTTGTTCATAATCCGATACTGATGCAAAACGCATCAAATAATGCACTTTTCCCTTCTGGATTTAATCCCATGCATGAGGTTAAGCCAGCAAGCCTGGGATTTTCAGTGGATGATCATCATCATCAAGGGCTTCGAAGCAGATATGGTGTTCATCATCAAGAGAATAATAATAATATTAATGCTGGTGGAGGCAGGTTATTGTTTCCCTTTGGAGATGTCAAGCCGATTTCAGGAACTCATGAAGTTGAAGAAAATAATAAAGAACATGCAGCTGGGAATTCATCTTCTGGGTATTGGACTGGAATGATTGGTGAAGGATCCTGGTAA 834 0.4089 MEGNIEGNNNNKVGLEKTARPQEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKKLIPTTNSSSSSKLLPDLNPPSTPVPSNYSSSQNPKMLMQGGQDLNLAFPPIMENYDHHHGLSYQSSSSSSSTSALMLLRAGMASNNHHHPFVHNPILMQNASNNALFPSGFNPMHEVKPASLGFSVDDHHHQGLRSRYGVHHQENNNNINAGGGRLLFPFGDVKPISGTHEVEENNKEHAAGNSSSGYWTGMIGEGSW 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g1121 277 MobiDBLite consensus disorder prediction 66 111 - -
Lele42g1121 277 ProSitePatterns Zinc finger Dof-type signature. 27 63 IPR003851 GO:0003677|GO:0006355
Lele42g1121 277 Pfam Dof domain, zinc finger 23 79 IPR003851 GO:0003677|GO:0006355
Lele42g1121 277 ProSiteProfiles Zinc finger Dof-type profile. 25 79 IPR003851 GO:0003677|GO:0006355
Lele42g1121 277 MobiDBLite consensus disorder prediction 78 111 - -
Lele42g1121 277 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 16 175 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g1121 Lele-ChrLele42 23615375 23616208 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g1121 17 277 C2C2-Dof Transcription Factor Family AT3G61850 46.479 1.99e-60 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lele42g1121 zf-Dof 2.3e-33 No_clan