Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g1167 ATGGAAGGGAATATAGAAGGAAGCAATAATAATAAAGTAGGGTTAGAGAAGAAGGCCAGGCCACAAGAACAACTGAATTGTCCAAGGTGCAATTCTACAAACACCAAGTTCTGCTACTACAACAATTATAGCCTCACACAACCAAGATACTTCTGCAAAACTTGCAGAAGGTACTGGACTGAAGGTGGGTCCCTCAGGAATGTCCCTGTTGGAGGAGGTTCCAGAAAGAACAAGAAGCTCATCACAACTACTAATCCTTCATCTTCATCATCAAAGCTTCTTCATGAATTGAATCCACCATCAACTTCTTCTGTTCCTTCTTCTTCTTCTCCTCCTCAGAACCCTAAAATGTTAATGCAAGGAGGTCAAGATCTTAATCTTGCTTTCCCACCTATTATGGAGAATTATGACCACCATCATGGGCTTAGTTATCAAAGCTCTTCGTCTTCTTCAACTTCTTCTTCTTCTTCTTCTTCTACTTCTGCTTTGATGCTACTGAGAGCAGGCATGGCTTCTAATAATCATCATCACCCTTTTGTTCATAATCCGATACTGATGCAAAACTCATCAAATAATGCCCTTTTCCCAGCTCCTTCTGGGTTTAATCCCATGCATGATGTTAAGCAAGCAAGCCTTGGATTTTCAGTGGATGATCATCATCATCAAGGGCTTCGAAGCAGATTTGGTGTTCATCAAGAGAATGATAATATTAATGCTGGTGGAAGCAGGTTATTGTTTCCTTTTGGAGATGTCAAGCAGATTCCAGGAGCTCATCATGAAGTTGAAGAAAATAATAAAGAACATGCTGGGAATTCAGCTTCTGGGTATTGGACTGGAATGATTGGTGAAGGATCCTGGTAA 861 0.4065 MEGNIEGSNNNKVGLEKKARPQEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKKLITTTNPSSSSSKLLHELNPPSTSSVPSSSSPPQNPKMLMQGGQDLNLAFPPIMENYDHHHGLSYQSSSSSSTSSSSSSSTSALMLLRAGMASNNHHHPFVHNPILMQNSSNNALFPAPSGFNPMHDVKQASLGFSVDDHHHQGLRSRFGVHQENDNINAGGSRLLFPFGDVKQIPGAHHEVEENNKEHAGNSASGYWTGMIGEGSW 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g1167 286 ProSitePatterns Zinc finger Dof-type signature. 27 63 IPR003851 GO:0003677|GO:0006355
Lele41g1167 286 ProSiteProfiles Zinc finger Dof-type profile. 25 79 IPR003851 GO:0003677|GO:0006355
Lele41g1167 286 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 16 175 IPR045174 GO:0003700|GO:0006355
Lele41g1167 286 MobiDBLite consensus disorder prediction 77 120 - -
Lele41g1167 286 MobiDBLite consensus disorder prediction 66 121 - -
Lele41g1167 286 Pfam Dof domain, zinc finger 23 79 IPR003851 GO:0003677|GO:0006355
Lele41g1167 286 MobiDBLite consensus disorder prediction 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g1167 Lele-ChrLele41 20692615 20693475 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g1167 17 286 C2C2-Dof Transcription Factor Family AT3G61850 45.993 9.11e-63 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lele41g1167 zf-Dof 2.4e-33 No_clan