Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0950 ATGCAAGACCCAACGTTATTCCAATCCATGAAAAGCCATGGATTCCCAGAACAAGAACAGGTCAAGTGCCCACGTTGTGATTCCACGAACACCAAGTTCTGCTACTACAACAATTACAACCTCTCGCAACCCCGCCATTTCTGCAAGAGTTGCAGAAGGTACTGGACCAAGGGAGGCACTCTCCGCAACATCCCCATCGGAGGAGGAAGCCGGAAGAACACAAAGCGATCATCCACCAGCACCAAACGATTATCTGCAACGTCATCTTCACCATCATCATCATCTTCTCCGTTGGTTTCGTCGGCCATTGGAGGCGCAGACCCGACCCGTGTTTATACCTCCTCGATGGGCGGGAGTTTCAGTTCGCTTCTGGCATCATCATCTTCATCTGGGCATCTGGGGAGTGTTCTGGAGGGTTTGAATCCAAATGGATCGGTTCTGAAAATGGCGGAAGCTGGTGAATTTGGGGCGAAGGTGAGCTCTGTTGAACGGGTTGTAGATCCGAATGCGGAGATGCAGATTAATGGCGTTTCAAAGAGGTTTCTTGGTTTGCAGAATGGTGATTTGAGCTGTGGGAATAGCGCTAGCGAGTCGTCAAACCTAGCGATGTATACACCAGGCTCGAGCTTTCAATAG 636 0.5016 MQDPTLFQSMKSHGFPEQEQVKCPRCDSTNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGTLRNIPIGGGSRKNTKRSSTSTKRLSATSSSPSSSSSPLVSSAIGGADPTRVYTSSMGGSFSSLLASSSSSGHLGSVLEGLNPNGSVLKMAEAGEFGAKVSSVERVVDPNAEMQINGVSKRFLGLQNGDLSCGNSASESSNLAMYTPGSSFQ 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0950 211 Pfam Dof domain, zinc finger 19 75 IPR003851 GO:0003677|GO:0006355
Lele41g0950 211 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 16 152 IPR045174 GO:0003700|GO:0006355
Lele41g0950 211 ProSitePatterns Zinc finger Dof-type signature. 23 59 IPR003851 GO:0003677|GO:0006355
Lele41g0950 211 MobiDBLite consensus disorder prediction 62 102 - -
Lele41g0950 211 MobiDBLite consensus disorder prediction 70 102 - -
Lele41g0950 211 ProSiteProfiles Zinc finger Dof-type profile. 21 75 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0950 Lele-ChrLele41 19006758 19007393 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0950 15 133 C2C2-Dof Transcription Factor Family AT1G51700 55.725 4.33e-42 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lele41g0950 zf-Dof 2.4e-33 No_clan