Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0293 ATGCAAGACCCAACGGTGTTCCAGCCGATGAAACCCCAATTTCCTGAACAAGAACAGCTTAAATGTCCGCGTTGTGATTCTACTAACACCAAATTCTGCTACTACAACAACTATAATCTCTCCCAGCCACGCCATTTTTGCAAGAATTGCAGAAGGTATTGGACCAAAGGCGGTACTCTTCGAAACATACCAGTCGGTGGTGGAAGCAGGAAGAACACGAAACGATCGTCAACCACCAAACGCCCTCCTCCTGCTACTTCTTCAACATCATCTCCTCCTGCATCGGTTTCACCTGCCTCAACAGTTCGTCCGGATCCTGACCCGGCCCGGTTTTTTGCCAACCAGAGTGGTCCCATGAACATTGGTGGGAGTTTCAGTTCCCTTCTGGCGTCAACTGTGCAGTGGGGAGGTTTATTGGAAGGTCTGAATTCAAATGGGCCTGGTTTGAGAATGATTCAACTGAATGAATTTGGGGAGAACGTGGGTTCTGGCCATGTGAAGAATTCGGATTCTGGTCGAAACCCAGGGCTGGAAAGGCAGAGCAATGGTAATTCGGAGAGCTTTCTGGGTAAGCAAAATGTTGATTCAAGCTGTTGGAATGGTGGTAGCAATGGGTGGTCTGATCTTGCAATATATACACCAGGCTCAAGCTATCAGTAG 660 0.4818 MQDPTVFQPMKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGTLRNIPVGGGSRKNTKRSSTTKRPPPATSSTSSPPASVSPASTVRPDPDPARFFANQSGPMNIGGSFSSLLASTVQWGGLLEGLNSNGPGLRMIQLNEFGENVGSGHVKNSDSGRNPGLERQSNGNSESFLGKQNVDSSCWNGGSNGWSDLAIYTPGSSYQ 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0293 219 MobiDBLite consensus disorder prediction 69 98 - -
Lele40g0293 219 MobiDBLite consensus disorder prediction 162 189 - -
Lele40g0293 219 MobiDBLite consensus disorder prediction 61 115 - -
Lele40g0293 219 ProSitePatterns Zinc finger Dof-type signature. 22 58 IPR003851 GO:0003677|GO:0006355
Lele40g0293 219 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 15 164 IPR045174 GO:0003700|GO:0006355
Lele40g0293 219 Pfam Dof domain, zinc finger 18 74 IPR003851 GO:0003677|GO:0006355
Lele40g0293 219 ProSiteProfiles Zinc finger Dof-type profile. 20 74 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0293 Lele-ChrLele40 2384266 2384925 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0293 5 139 C2C2-Dof Transcription Factor Family AT1G51700 53.901 2.15e-45 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lele40g0293 zf-Dof 2e-33 No_clan