Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0865 ATGGTGGAAACAGGATTAAGATTGGGGAGACTCAGGCCATTGTTGAGTGTGTGTTGCATAGTTATGCCTATTGTAGGGGTTATTACTTGGCTTCACTATACTTCAATCTCTTATCTTCTTCTGGAATTCCCCAACATCAGCTTCTTGTCTGCAAAACCAGACCCAGCCATTGGAATCAAAGGGAAAGAACATACCATTACTCCACCATCAGGTAAAAATTATGGATCACTAGGCTGTACAAAGGATAATTCATCTAGTCCAACAAGAGTTGATGGAGGATCATGCTTAAGCAGACATGAATATCACTTATACCGCAAAGCTTCACCTCATAAGCCCTCTTCATATCTGAAATCCAAGCTTCATCACTATGAAAATCTTCACAGAACCTATGCATCTTCCTTCTCCTTCATCAGAAACCAGTCCAACCCTAATTCAAGCAACAAGCATGCTGCTTCTACTATAAACTGCAAATACCTTATCTGGACAGCCATGGATGGCTTAGGAAACAGAATACTAAGCTTAGTTTCTGCATTTCTTTATGCTCTTCTCACAGCCAGAGTTCTTCTTGTCAAATTTGAATCTGACATGGATGGTCTCTTCTGTGAGCCATTTCCAAATTCATCATGGTTATTGCCAACTAGGGATTTTTCTCATCATCATTGGGAAGATGATCAGGATCATGATGATCATCGCGCTGTTCTTCATCTACGACACACCAATGATGATCATTATGATTTTTTCCACTGTGGTTCTACTCAAGATCTTCTGCAGAATGTTCCTGTGTTGATTTTGCAGTCAAATCAGTACTTTGTTCCTTCTCTTTTCATGATCCCATCTTTCAGACAAGATCTAACCCAAATGTTCCCAGAAAAAGACACAATCTTTCACCTTCTAGGAAACTACCTTCTTCACCCATCAAACGCAGCATGGAAATTCATCAGAAACTTCTATCAAACTCATTTATCCATGGCAACTCAGAAGATTGGCCTCCAGATTAGAGTATTTGACACAAATAAACAACCCCATCAAGTTGTTCTCAACACAGTCTTATCTTGTACCTCAAAACACAATCTTCTGCCTAAACCAGATGAGAAAATATCAGTAACTTCTTCTCAATCCCAGAATTATAGTAATACCTCAAAAGCTGTTCTTGTCATTTCTTTATATTCAGAATATGGAATCAAGCTAAAAGCTAGGTATATGGAAAATGAAGTGATAAGAGTTTATCAGCCAAGTCATGAAGAACATCAAAACTCAAAAGATAATAAGCACAACATGAAAGCTTGGACTGAGATGTATCTGCTGAGTTTATGTGATGTGTTGATTACAAGTTCATTTTCTACTTTTGGGTATGTTGCTCAGAGCCTTGGAGGTTTGAAGCCATGGATTCTGAAGGGGTCATTAAGTGGAAAGGTTCCAGATCCTCCATGTGAAAGAGTCATTTCCATGGATCCTTGTTTTCACTTTCCTCCTAAACGTGACTGTAGTTCCAATACTATTATCAATGTTACTTCTTTCTTTCCTCATACTAGGCACTGTGAAGACTTTGACACCGGACTGAAACTTATTAATTAG 1575 0.386 MVETGLRLGRLRPLLSVCCIVMPIVGVITWLHYTSISYLLLEFPNISFLSAKPDPAIGIKGKEHTITPPSGKNYGSLGCTKDNSSSPTRVDGGSCLSRHEYHLYRKASPHKPSSYLKSKLHHYENLHRTYASSFSFIRNQSNPNSSNKHAASTINCKYLIWTAMDGLGNRILSLVSAFLYALLTARVLLVKFESDMDGLFCEPFPNSSWLLPTRDFSHHHWEDDQDHDDHRAVLHLRHTNDDHYDFFHCGSTQDLLQNVPVLILQSNQYFVPSLFMIPSFRQDLTQMFPEKDTIFHLLGNYLLHPSNAAWKFIRNFYQTHLSMATQKIGLQIRVFDTNKQPHQVVLNTVLSCTSKHNLLPKPDEKISVTSSQSQNYSNTSKAVLVISLYSEYGIKLKARYMENEVIRVYQPSHEEHQNSKDNKHNMKAWTEMYLLSLCDVLITSSFSTFGYVAQSLGGLKPWILKGSLSGKVPDPPCERVISMDPCFHFPPKRDCSSNTIINVTSFFPHTRHCEDFDTGLKLIN 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0865 524 Pfam Xyloglucan fucosyltransferase 90 218 IPR004938 GO:0008107|GO:0016020|GO:0042546
Lele39g0865 524 Pfam Xyloglucan fucosyltransferase 231 495 IPR004938 GO:0008107|GO:0016020|GO:0042546
Lele39g0865 524 Gene3D - 311 460 - -
Lele39g0865 524 PANTHER FUCOSYLTRANSFERASE 2-RELATED 88 523 IPR004938 GO:0008107|GO:0016020|GO:0042546
Lele39g0865 524 Gene3D - 153 207 - -
Lele39g0865 524 FunFam Galactoside 2-alpha-L-fucosyltransferase 154 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0865 Lele-ChrLele39 17570492 17572863 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g0865 91 523 Xyloglucan Fucosyltransferase1 AT2G03220 46.187 3.61e-131 391
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele37g0569 37 4707542 4708175 Lele39g0865 39 17570492 17572863 hybridization