Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0402 ATGGATGACACTGAGGATGATGCAAAGTATGGTCCTAATCCATATGATGTAAGTCATCACCAAGGTTATGGTTATTTGAATAGTCAGAAACTTCCAGTTGGGAGTTCTCAACATTCTCAGCCAGTTAGAAGTGATTATGCTGAAGATGATAATGATTATGAGGAAGAAGACAATGGAGAACAGTTAGAACAGGGGGAGGAGGAGGAAGAAGATGATGATGTTGATGTTGATGTTGATCAAGGTAACATTAATCAAGTTCCCCAAAAAGATGGCGATGACAACTGTGATGACGAAGAAGATGATGACATTGATGAGAATGGGGATGGGGATGATAGTGATGATGACGCTGATGCTGATGCTGATGCTGAAGAAGATGATAAGCAGAAAAGTTATACCATAAGGATTGAAGATGGTTTAGAATCTCACCCAAAAAAGAGAAAGCTAAAGAGTTTGATTTCAACTTATGAATTTGCCCCCCGTGTACCTGCTCCAGCTGTTGCAGCTCCTAAACCATCATTTGGTGGTAGAAATTCCCTTACTGACTGGACTGAGCACGAGACATTTGTTCTTCTCGATGCTTGTGGGGAGCGGTTTATTCAACGGGGAAAGAAGAGTCTTCGGTCTGAGGAATGGCAAGAAGTTGCAGAAAGGGTAAAAGAAGTTTCAAAAGTTGAAAGGACAGATACTCAGTGTAGGAATAGGCTTGACACATTAAAGAAAAAGTACAAAAAGGAGAAGGCGAAATTAGCAGAAATGGGTGGTGGAACCGGCAAATGGGTTTATTTTAATAGGATCGATAAGCTGTTGTCTTCTCCTCAACAACAAGCTGGTCTATCTTGTGGTTTGGACTCGGGAGAGTATGTTTTCTCGAACCCTCAAGTTTATCTAAACCGTGCGAATGTGTTTGACGAAATGAGGGATAGTCCGGGGAATTCAGAGTCCACTGGCGATGAAGATTTGGTTGGACTCCAACCAAAGAAACGGAGGTCTAGAAGGAACAAAGACGAGACTTCTTCCTTCAAATTACTCGCTGATTCCATTCAGAAGTTCAGCGAGATATATGAGAAGATTGAAAACAACAAAAGGCAACAGATGATGGAACTAGAAAAGATGAGGATGGAATTCCAAAAGGAATTGGAAATGCAGAAGAGGCAAATTTTCGAGAAAGTGCAGAACGAGATCGTGAAACTGCATCAGAGAGATGAGGAGGAGAACGAGGAATCAGCTGAGAACGATGCTTCTTTTGCAATTCTTCTGATTTTCATTTCCCTTACTGGAGTTTTCATTCAGTGGAACTGTTCAAGTCGCACTTTAACTTTAAGAAATCGTACACAAATAACCTTTCGCCTAGAGAGAGAATTGGCCTCTTACCCATCATTTGGCAAAAATAGACTACTAGCACTATGA 1407 0.4115 MDDTEDDAKYGPNPYDVSHHQGYGYLNSQKLPVGSSQHSQPVRSDYAEDDNDYEEEDNGEQLEQGEEEEEDDDVDVDVDQGNINQVPQKDGDDNCDDEEDDDIDENGDGDDSDDDADADADAEEDDKQKSYTIRIEDGLESHPKKRKLKSLISTYEFAPRVPAPAVAAPKPSFGGRNSLTDWTEHETFVLLDACGERFIQRGKKSLRSEEWQEVAERVKEVSKVERTDTQCRNRLDTLKKKYKKEKAKLAEMGGGTGKWVYFNRIDKLLSSPQQQAGLSCGLDSGEYVFSNPQVYLNRANVFDEMRDSPGNSESTGDEDLVGLQPKKRRSRRNKDETSSFKLLADSIQKFSEIYEKIENNKRQQMMELEKMRMEFQKELEMQKRQIFEKVQNEIVKLHQRDEEENEESAENDASFAILLIFISLTGVFIQWNCSSRTLTLRNRTQITFRLERELASYPSFGKNRLLAL 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0402 468 MobiDBLite consensus disorder prediction 22 42 - -
Lele38g0402 468 MobiDBLite consensus disorder prediction 123 138 - -
Lele38g0402 468 Coils Coil 354 385 - -
Lele38g0402 468 Pfam Myb/SANT-like DNA-binding domain 181 268 IPR044822 -
Lele38g0402 468 MobiDBLite consensus disorder prediction 320 337 - -
Lele38g0402 468 MobiDBLite consensus disorder prediction 1 138 - -
Lele38g0402 468 MobiDBLite consensus disorder prediction 305 337 - -
Lele38g0402 468 MobiDBLite consensus disorder prediction 48 78 - -
Lele38g0402 468 Gene3D - 182 244 - -
Lele38g0402 468 MobiDBLite consensus disorder prediction 92 122 - -
Lele38g0402 468 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 170 403 IPR044823 -
Lele38g0402 468 ProSiteProfiles Myb-like domain profile. 182 239 IPR001005 -
Lele38g0402 468 Coils Coil 387 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0402 Lele-ChrLele38 3236196 3239581 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0402 182 410 Trihelix Transcription Factor Family AT1G54060 34.559 4.76e-24 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lele38g0402 Myb_DNA-bind_4 1e-19 CL0123