Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0118 ATGGAAGGAATACCTAATCAGAACTCAGTGACAAAGCCAGTAATGATAGAGAAGAAGGCGAGGCCACAAGAACAATTGAACTGTCCAAGGTGCAATTCAACCAACACCAAGTTCTGCTACTACAACAACTATAGCCTCACACAGCCCAGATACTTCTGCAAGACTTGTAGAAGGTACTGGACAGAAGGTGGGTCCCTCAGAAACATCCCAGTTGGAGGAGGTTCTAGAAAGAACAAGAACAAGATCATCACTAATTCCTCTTCCTCTTCTTCATCAACCTCATCATCGTCATCAAAGGTTCCTGATCTAAATCCACCATTACCGAGTAGCCTCTCAGGGTTGAAGGATCCAACAAGTTTGAACCTCTCTCGAAGCCAGATGATGAACCAAAGCTTCCCAGTGAATTGTTCTATTCCCACCCAGCAAAGTCCTAAGATCCATGGAGGAGGCCAGGATCTTAATCTGGCTTTTCCCACTTCTTCTCTTTCAGCTCCTAGGGTTTTGAATAACAATAGTAATATCCCTTATGTTCCTTCATTCATGATGCCAAATAGATCATATGGTAACCTTAATTACCCATCATCTGCATTTATTCCCATGCAAGAAACTAAACCTAGCCAGAAGCTGGGATTCTCTGTGGATGGTCTTGGAAATAGATCATACGGCGGAGTACAAGACAATGATCATAATAATGGCGGGAGACTTTTGCTTCCATTTGGAGGAGTGAAGCAGATTCCAGGAGGTGATCATGAAGTGGAACAAAATAATAAAGAACAAGGGAATTCAAGTGGGTTTTGGACTGGAATGATTGGTGAAGGATCATGCTACGTCTCGATCTCTGTCTGCACTGACGACATTCGTCACATATTAATAGGTGAATTATATATAGACTATATATATGTACACATATGTACTTTAAAGTTTGTCTTTTAA 933 0.4148 MEGIPNQNSVTKPVMIEKKARPQEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKNKIITNSSSSSSSTSSSSSKVPDLNPPLPSSLSGLKDPTSLNLSRSQMMNQSFPVNCSIPTQQSPKIHGGGQDLNLAFPTSSLSAPRVLNNNSNIPYVPSFMMPNRSYGNLNYPSSAFIPMQETKPSQKLGFSVDGLGNRSYGGVQDNDHNNGGRLLLPFGGVKQIPGGDHEVEQNNKEQGNSSGFWTGMIGEGSCYVSISVCTDDIRHILIGELYIDYIYVHICTLKFVF 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0118 310 MobiDBLite consensus disorder prediction 1 24 - -
Lele38g0118 310 MobiDBLite consensus disorder prediction 78 120 - -
Lele38g0118 310 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 17 187 IPR045174 GO:0003700|GO:0006355
Lele38g0118 310 ProSitePatterns Zinc finger Dof-type signature. 28 64 IPR003851 GO:0003677|GO:0006355
Lele38g0118 310 MobiDBLite consensus disorder prediction 67 120 - -
Lele38g0118 310 Pfam Dof domain, zinc finger 24 80 IPR003851 GO:0003677|GO:0006355
Lele38g0118 310 ProSiteProfiles Zinc finger Dof-type profile. 26 80 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0118 Lele-ChrLele38 934326 935839 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0118 14 270 C2C2-Dof Transcription Factor Family AT3G61850 43.165 5.82e-48 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lele38g0118 zf-Dof 8.4e-33 No_clan