Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g1358 ATGTATGAGCATACATCATCCTTTGATCCCAACACAATGGCAGATGGCACTGTTTCCCTAAAAGACGGCCTTCCCGATGCGCCGCTGCTCATGGCTGCTGGCAACCTCACAAGCAGTAACAATGGCTTGGACGAAAATCTCAAGCTCACAGTGGAAGAGCTCTCCTATCACCAGCACCGGCACCGGAATCATCCACCGCCGCTGCACCCAGAAGACGTCTTGGCCTTTGCTAACGGCGTCGCCGCCGCACCATTGGACCTCTCGCACCCTCAAAATTTTGTTCTGAACGTAGAAAACTCGTACAACAATGAGAATTTGGTTCATCAAGTCATCGATGTCCTCAATTATGATCAATCCACTTGGGACCCTAAAGTTCAAGAGTTGCAGGGCGTGGGTTATTCTAATCACCACCATGAACAACAGCAACCCCAACAATTTCATCAAATTGAGACCCAAAGCTACAATTTTTCTTCCATTCTCGACCCTCCTCCTCCTTACCCGTCTTCTAATCTCCTCGATCTCCTCCATTACAACCCAGCCCAGAAGATACCCAATATCCCAAATTCCATGGGATTTCTCGGCGACATTCCGATAGGATCAGATAACACAAGCGCGTGCTCTGTCTTGTATGATCCTCTGCTTCATTTGAATCTGCCTCCACAGCCTCTAGCGCTAAGAGAGCTGTTTCAGTCTCTTCCTCGAGGCTATAGCTTGCCAACTAGCTCCAGAAATGATTCTCTTTTTGGTGGAGGGGATGAGACAGAGGGGAATGGGATTGTGTATCAGGATGGAGATGGAAGCCACCTTGACAATGGAGTTCTGGAATTTGACAGAGGAACTGCTCGTGTGGGCAAAGGAAGACAAGGGAAAGGCACCAAGCATTTTGCCACTGAGAAACAAAGAAGAGAGCAACTTAATGGTAAATACAATGTATTGAGGAATCTGATCCCAAACCCCACCAAGATAGATAGAGCATCTGTGGTGGGAGACGCCATTAACTATATTAAAGAGCTGATGAGAACAGTGAATGAGCTGAAATTGTTGGCGGAGAAGAAAAGATTTGGGATGGACAGGTGCAAGAGGCACAAACCTGGAGATGATGCTGGAGAGAGCTGTAACATGAAGCCCTATGTTGACCATCCAGAAGGATGCATAAGGACCTCATGGCTACAGAGGAAATCCAAAGACACCGAGGTTGATGTCCGAATCATCGACGATGAAGTCACAATCAAACTTGTTCAGAGGAAGAAGATCAGCTGCTTGCTGTTTGTCTCCAGGGTTCTTGATGAACTCCAGCTGGATCTTCACCATGTTGCAGGTGGACATGTTGGTGAATATTGCAGTTTCTTGTTCAACAGCAAGATATGTGAAGGTTCTTCAGTGTATGCAAGCGCCATAGCCAACAAGGTGATTGAGGTATTGGACTGGCAGTATGCAGCAGCTGTGCCACATACTACCAGTAGCTATTAA 1470 0.4714 MYEHTSSFDPNTMADGTVSLKDGLPDAPLLMAAGNLTSSNNGLDENLKLTVEELSYHQHRHRNHPPPLHPEDVLAFANGVAAAPLDLSHPQNFVLNVENSYNNENLVHQVIDVLNYDQSTWDPKVQELQGVGYSNHHHEQQQPQQFHQIETQSYNFSSILDPPPPYPSSNLLDLLHYNPAQKIPNIPNSMGFLGDIPIGSDNTSACSVLYDPLLHLNLPPQPLALRELFQSLPRGYSLPTSSRNDSLFGGGDETEGNGIVYQDGDGSHLDNGVLEFDRGTARVGKGRQGKGTKHFATEKQRREQLNGKYNVLRNLIPNPTKIDRASVVGDAINYIKELMRTVNELKLLAEKKRFGMDRCKRHKPGDDAGESCNMKPYVDHPEGCIRTSWLQRKSKDTEVDVRIIDDEVTIKLVQRKKISCLLFVSRVLDELQLDLHHVAGGHVGEYCSFLFNSKICEGSSVYASAIANKVIEVLDWQYAAAVPHTTSSY 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g1358 489 Gene3D - 286 358 IPR036638 GO:0046983
Lele35g1358 489 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 289 338 IPR011598 GO:0046983
Lele35g1358 489 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 291 357 IPR036638 GO:0046983
Lele35g1358 489 Pfam Helix-loop-helix DNA-binding domain 292 338 IPR011598 GO:0046983
Lele35g1358 489 SMART finulus 295 344 IPR011598 GO:0046983
Lele35g1358 489 CDD bHLH_AtMYC1_like 294 355 IPR045896 -
Lele35g1358 489 PANTHER TRANSCRIPTION FACTOR BHLH91 2 481 IPR045895 GO:0006355|GO:0048658
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g1358 Lele-ChrLele35 19533963 19535803 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g1358 8 483 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31220 37.718 1.13e-83 264
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele35g1358 HLH 1.7e-10 No_clan