Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g1261 ATGGAAACAAGCAGAGCCTGCTCCCCTGAACTTATGAAAACAAGCAGAGATGAGGCAAAGAGGAGCTTGACAATGTACAAGAAAGAGGAAGAGGAGGAGGAAGACGAAGAAGAAGAAGAAGCAGACCACGATGAAGAAGAGATAGGGAGTGAACTTGGCTCTGGAGTAGAACATGGGAGAAAGAGATGGGTTATATCAAATGCATACAGCAAGAGAGTCCCCAAACCAGGAAGCTTGTCAGCGCCACCGAGTTGTCAGGGCGATGGTTGCCACGCTGATCTAAGCCACGCCAGAGAGTATCACCGGCGGCACAAGGTCTGTGAGCACCACGCTAAAGCACCGAAAGTACTCATTTCAGGGCATGAGCGACGATTTTGCCAGCTATGTAGCAGGTTTCATGAGCTTTCAGAGTTTGACAACTCAAAACGGAGTTGTAGAAGGCGTTTGGCATCGTCTCGTGATCAGAGACTTTCATCTGATTATCTTGGAAAAGCGCAGCCCTCAGATAACACAACTCTTCATATTCCATCTCACATATATCGTGTCATATTCCGTATGTCAGCCACAGGTTCTCAGCTTGTTGCTCCTCTGACGCCAACACTGCCACCTACTCAGTCTCTTGGACCTAGTGGCTCCGGCTCCATTAGGCCTGGTTTCATGGCTGGCAGGGCTCTGATGGGCCACATATTCAAGCCGGAGGCTGCGCTCAAATGCCCTCGCTGCGATTCCACCAACACTAAGTTTTGCTACTTCAACAACTACGACCCCTCTCAGCCTCGCCATTTCTGCAAAACCTGTAGAAGGTACTGGACCCGAGGTGGGACCCTGCAAAATGTCCCAGCCGGCGGGGGATGCCGGAGGAACCAGAGAAGTAAAGGAAGCAGCTCAAAGTCGCCACCGGTGAGCTCAGATCGCCAGACAGGCAGTGCTACTTCAACCACCTCTGCGTCTTCCAGCAGTGCTTCTGCTTCGGATATAGTAGGCCAGGCCTACTACGGTTCGAGTTATCAAATGGGAGGAGTTGGTGACTTAAGTTCCATGTTCGATCATAATAAGATACCAGTTTCGATTCTCAATTTAGCTGCTGATCTTGCTATAGATCAACTTCTTCAAATCTTACTTTCTGGGGATGATCATGCACTCAACATTCGTCGTATCATGATTTGCACCAGAAATGATGATGAACGAAGACAAGTTTTTTATAAACTGCTAAAGGATATCGACAATATGCCTTGTTTTAATGAAATCTTTCATGAAGTCTTGTGGTTTAATGAGTCGTTGTGTCAAAGCCAAGTAAACGTAAAGGCTCATGCTCAAAAACTAATCAATCTGCAGCTTCGCCAGCTTTCGAGGATCAGTCAGAGCAATCACCAAAGCATGATCAGAAAGAAATATTTAGTGCTTGGTTTTGATGGATATGCTGAGAAAACTATAGATATGGGGAAATTGAATTTGGCTGGAGATGATGAGGCTATTATGGTGTTGATTACCACTGAATCTCGAAAGCAAGAAGCAAATGATAAAGGAACAATAGCGATGGATCTGGCAATCAGTACAAATGATCATTTGTTGCCATGCAGAGTCTTTTGTAAAACTGTAGGCAATGAGCTTGTCTTTTCATCTAGTGCCCTCCAGGAAATTGCAGTACGCATAGTCCAAGAATGTGGTGGCCATCTTTTAGCCATTGTCCTTGTGGCAAAGTCATTGGAGAATGTGAAGGATGTCGAATTCTGGGAACTTGCACTCAACAAATTGAGCTGCCTTAATCCTCCTTATGACATGAATATGTTTCAGGGCGTAAGCAGAGTTATGGTTACTACATTCATAAACTTCATCTGGAATGATATGAATCAAATACTAAAGCAATGCCTAATAAGTTGCTTATTCATTCCGGATATCAAAACTGGTAAGTTGTCAAATGAATTGATGCATCATTGGATTTCTTGGCAGTTAACGGATGATGGAGAAGGTCTGCATAACTTGAGAGAGCTTGTAGAATGCTCTGTCTTAATCCAAGATCAATCAAATGATAAGTATGTCCGATTGCCGGAGGACATACATGCTATTTTGCATTCATTGAACACCCTAACCCCTTTGTTCATGAAGAAACCTGGACTAGGGTTGACGGAACCACCAAAGGATGAGGAATGGCATAGTGTTGTACATATGGAACTTGCAAACAATAAACTATTTGAACTGCCTTTGTCTCCAAGCAGCCCTGAACTCAGAGTGTTAATGTTGCAGGGAAATGTTGATTTAACAAGAATCCCAAATACATTTTTTGTTAAAATGCCCTTGCTTACGATCCTGGACTTATCTTACACTAGTGTACGAGAACTACCAGACTCTCTTTTTGAGTTGGAGCAGCTCAGAGAAATGTATTTGAAAGTCTGTGAATGTCTCATGAAATTATCACCAAAAATTGGGAAATTGAAGAAACTTGAGAAGCTTGATCTTGAAGGAACTCAGATCATACATCTGCCAGAAGAGATTCAAGAGTTAACGAATCTCCAAAGCTTGTTCCTTTGCTTCTATGAATATCGTGGCAAAAAAGGTAAGCAATACACGTGCTCAAAAATTATTCCATCTGAGGTAATCTCAAAACTAAAGGGGCTAAAACATTTAAGTATTGATGTGAACCCTGATGATGAGCGGTGGTATGAGAATGTACAAGACATTCTTCCAGAAATATTGGGATTAGAGTATTTGCTGACTCTTAGCTTATACATCCCACATCTGGAACTTTTAAAGTTCATACCAGACCGTATATTTCAGGTTGATTTTAAACTTATTGTTGGTAGGCATATGCCAAGGATCATATCAAGTACACCATCCACAGCTGAGGCAAAATTTAAGCAAAGTGATTGTAGCTTGAAGTTTGTAAATGGTGATCATGTCCCTAAAGAAATTAGAAGGCTTGCTAGGCATAGTAAGGCTTTATTTCTTGAGCGACACAAGACAATCAAGAATCTATCAGAATTTCAGGTGATGAATCTAGAACAGCTGCGCTTAAGAAGCATCTGGGAAGGGCCAATGCCACCTCGCTGCTTTTTTGGTATGCTCAAATCTTTAGTATTGCAAAATTGCCCTGAGTTAACAACTGTCTTTACCATGGTTTTTCTTGGCAATCTTTCACTATTAAAGGAAATTATGGTTAAGGATTGTCCCAAAGTAACCACATTGATTAGTGATGGATCATTCAAACATAACGGAGAGGTTTTCCTGCCTAAATTGAGAAAGATAATGCTTCTCCATCTTCCTGAGTTGATCACCATTTCCAAGGGATGTTACATAGGTCCAAGATTGAATAATATGGCAATTTATGATTGCCCAAAGCTCCAAAGCCTTTCTCGGTCGGAACTGTCAAGCCAAACTCTGAAGATCATTAAGGGAGAAATCAAGTGGTGGGACCAACTGCAATGGATCAAAGAAGAATGGGGAATATCGCAACGACCATCAAAATTTGATAGCGTCTTTTCCTCAATTGATAATGAGGTTGATATAATGACTCAAATTTGGAATGATGATGTTGACATTGACGATGATGCAGATATGACGCCGCTACAGACTATATTTGAGCACCCAAAGCAAATTTCTGATAGAGTGACTTTTTCAGTGGCAATAGAAACGGCTGAACTCGGAGATTTTGTTTTAGATGATGGGTACAGGTGGAGGAAATATGGCCAAAAAACAATGGGGATAGTGGGTGAGCCACTGCAGTCTTCCAGTGTAACAAATGCCTCCATGAACAGTCAGGGCGACTTAAGGACTCAATCTGGGGTAGATGACCATCATCAGGTGTTACGGCCTTCCAGTTTGAGGATCTTAGAGGAAGAAAAGCAAATTGCTAACACAAGCAGAGCCAAAAAGCCTCTTGACCCTTGGAAAGTGGGTTTTCCTGAAGAACTTGCAGGAGTCGTGGTGTGCATTACCACTGAATCTTCCAAGCAGGCTAATAGTGAATTAACAATGGCAATGGATCTGAATATCAACACAAAAGATCACTTGTTGCCTTGGGAAGTTTTCTGTGCAAATATCGGCACTACGATCTTGCAATCATCTTATTCTGAGAGAATGGCCGTGCGTATAGTTAAAGAATGCGGTGGCCATCTTTTTGCCGGTGTCATTGTAGCAAAGTCACTACGGAATGTAAAATATGTTGAACATTGGGAACATGCTCTGCACAAATTGTGCAACAAGCTGTCTGAGCTACCTTCGTCCCCGAATTGTCATGAACTCGAAGTGTTAAAGTTGCTCAACAGAGCTGACTTGACAAAAATCCCACCCCTTTTCTTCTCTGAAAGTGCACTACCTGCCGTGAAGAAAAACAAACAAAGTGAGTGCAGCTTTAAGTTTGTGGTAGGTGTTGATGTCCCCTATGCAATAACAAGTGCTGTAAAACATAACAAAACTTTATTTTTAGATCGACATATGACCATCAAGGATCTCTCAAAATTTGGCATGACTAGTATAGAGCAAATACAGGTGTGTATATTGGCTGAATGTAAGGAGATGCAAACAATTGTTGATGGAAGAAGCCCAAGCAGTACGGATATATTTCCCCGTTTGCTAGTGTTGAGTGTATCGTACATGAAGAATCTAAGAAGCATTTGTGAAGGAGAAATTCATTCCAGTCACAGTTTTGGTATGTTGAAGACCTTAGCATTTCACAATTGTCCTACGTTAACAATTGTTTTCACCTTGGATTTTCTGGGCAACCTTTCACTCTTGAAGGAGCTTGAGTTAAAGATTGTCCAAAAATAA 4764 0.419 METSRACSPELMKTSRDEAKRSLTMYKKEEEEEEDEEEEEADHDEEEIGSELGSGVEHGRKRWVISNAYSKRVPKPGSLSAPPSCQGDGCHADLSHAREYHRRHKVCEHHAKAPKVLISGHERRFCQLCSRFHELSEFDNSKRSCRRRLASSRDQRLSSDYLGKAQPSDNTTLHIPSHIYRVIFRMSATGSQLVAPLTPTLPPTQSLGPSGSGSIRPGFMAGRALMGHIFKPEAALKCPRCDSTNTKFCYFNNYDPSQPRHFCKTCRRYWTRGGTLQNVPAGGGCRRNQRSKGSSSKSPPVSSDRQTGSATSTTSASSSSASASDIVGQAYYGSSYQMGGVGDLSSMFDHNKIPVSILNLAADLAIDQLLQILLSGDDHALNIRRIMICTRNDDERRQVFYKLLKDIDNMPCFNEIFHEVLWFNESLCQSQVNVKAHAQKLINLQLRQLSRISQSNHQSMIRKKYLVLGFDGYAEKTIDMGKLNLAGDDEAIMVLITTESRKQEANDKGTIAMDLAISTNDHLLPCRVFCKTVGNELVFSSSALQEIAVRIVQECGGHLLAIVLVAKSLENVKDVEFWELALNKLSCLNPPYDMNMFQGVSRVMVTTFINFIWNDMNQILKQCLISCLFIPDIKTGKLSNELMHHWISWQLTDDGEGLHNLRELVECSVLIQDQSNDKYVRLPEDIHAILHSLNTLTPLFMKKPGLGLTEPPKDEEWHSVVHMELANNKLFELPLSPSSPELRVLMLQGNVDLTRIPNTFFVKMPLLTILDLSYTSVRELPDSLFELEQLREMYLKVCECLMKLSPKIGKLKKLEKLDLEGTQIIHLPEEIQELTNLQSLFLCFYEYRGKKGKQYTCSKIIPSEVISKLKGLKHLSIDVNPDDERWYENVQDILPEILGLEYLLTLSLYIPHLELLKFIPDRIFQVDFKLIVGRHMPRIISSTPSTAEAKFKQSDCSLKFVNGDHVPKEIRRLARHSKALFLERHKTIKNLSEFQVMNLEQLRLRSIWEGPMPPRCFFGMLKSLVLQNCPELTTVFTMVFLGNLSLLKEIMVKDCPKVTTLISDGSFKHNGEVFLPKLRKIMLLHLPELITISKGCYIGPRLNNMAIYDCPKLQSLSRSELSSQTLKIIKGEIKWWDQLQWIKEEWGISQRPSKFDSVFSSIDNEVDIMTQIWNDDVDIDDDADMTPLQTIFEHPKQISDRVTFSVAIETAELGDFVLDDGYRWRKYGQKTMGIVGEPLQSSSVTNASMNSQGDLRTQSGVDDHHQVLRPSSLRILEEEKQIANTSRAKKPLDPWKVGFPEELAGVVVCITTESSKQANSELTMAMDLNINTKDHLLPWEVFCANIGTTILQSSYSERMAVRIVKECGGHLFAGVIVAKSLRNVKYVEHWEHALHKLCNKLSELPSSPNCHELEVLKLLNRADLTKIPPLFFSESALPAVKKNKQSECSFKFVVGVDVPYAITSAVKHNKTLFLDRHMTIKDLSKFGMTSIEQIQVCILAECKEMQTIVDGRSPSSTDIFPRLLVLSVSYMKNLRSICEGEIHSSHSFGMLKTLAFHNCPTLTIVFTLDFLGNLSLLKELELKIVQK 1587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g1261 1587 Gene3D - 526 597 IPR042197 -
Lele35g1261 1587 Gene3D - 77 146 IPR036893 GO:0003677|GO:0005634
Lele35g1261 1587 Gene3D Ribonuclease Inhibitor 858 1143 IPR032675 -
Lele35g1261 1587 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 232 327 IPR045174 GO:0003700|GO:0006355
Lele35g1261 1587 MobiDBLite consensus disorder prediction 280 319 - -
Lele35g1261 1587 SMART LRR_typ_2 811 834 IPR003591 -
Lele35g1261 1587 SMART LRR_typ_2 764 787 IPR003591 -
Lele35g1261 1587 MobiDBLite consensus disorder prediction 282 319 - -
Lele35g1261 1587 SUPERFAMILY L domain-like 642 1142 - -
Lele35g1261 1587 Gene3D Ribonuclease Inhibitor 701 857 IPR032675 -
Lele35g1261 1587 SUPERFAMILY L domain-like 1397 1581 - -
Lele35g1261 1587 ProSiteProfiles Zinc finger Dof-type profile. 236 290 IPR003851 GO:0003677|GO:0006355
Lele35g1261 1587 Pfam SBP domain 85 156 IPR004333 GO:0003677
Lele35g1261 1587 Coils Coil 16 47 - -
Lele35g1261 1587 Pfam Dof domain, zinc finger 235 290 IPR003851 GO:0003677|GO:0006355
Lele35g1261 1587 MobiDBLite consensus disorder prediction 1 57 - -
Lele35g1261 1587 Pfam Leucine rich repeat 740 796 IPR001611 GO:0005515
Lele35g1261 1587 ProSitePatterns Zinc finger Dof-type signature. 238 274 IPR003851 GO:0003677|GO:0006355
Lele35g1261 1587 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 416 627 IPR027417 -
Lele35g1261 1587 MobiDBLite consensus disorder prediction 29 47 - -
Lele35g1261 1587 ProSiteProfiles WRKY domain profile. 1217 1272 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele35g1261 1587 MobiDBLite consensus disorder prediction 11 28 - -
Lele35g1261 1587 Gene3D Ribonuclease Inhibitor 1370 1584 IPR032675 -
Lele35g1261 1587 ProSiteProfiles Zinc finger SBP-type profile. 82 159 IPR004333 GO:0003677
Lele35g1261 1587 SUPERFAMILY SBT domain 83 156 IPR036893 GO:0003677|GO:0005634
Lele35g1261 1587 Pfam NB-ARC domain 452 586 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g1261 Lele-ChrLele35 18709370 18719195 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g1261 215 337 C2C2-Dof Transcription Factor Family AT2G37590 54.472 1.47e-37 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lele35g1261 NB-ARC 1.3e-05 CL0023