Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g0788 ATGAATGTTCAAGAAGGTGGTGATGGTGGTGGTGGAGGAGAGGTGAATAACCAAGTTCAGCTTCAGCCGCTACAGCCGCAGAGATGTCCTCGCTGTGATTCTGTGAACACCAAGTTCTGCTACTACAACAACTACAGCCTCTCGCAGCCACGGTACTTCTGCAAAACGTGTAAGAGGTACTGGACTCATGGTGGATCCCTGCGAAACATACCCATCGGTGGTGGTTGCCGGAAGGGAAAGCGGACAAAAGCGTCCTCGTCAGCTTCGTCATCATCCACCGCCCTGCAGCTGATGAGCCGGCCGCAACAGCTGCAACAACCTTGGCTGCAAGAGGCGATCCCTACTCAACCGAACCTGATGATGTCGCCTCCACGCGTTCTCGTCGGTCGTTCTCCCGCGGTGAAGGCTGCACCACCCGAGGTTCCTTCGATCAGTTCCAACTATCAAGGTGGTGGGTATCTATCATCTCTGGCGGCGATTCACTCCCAAAACCCATTATCACAACCATTATTCGATCTGTCCTCTCTGAATCTTGGTCCTTCCAATCTAGGTCTTCATCCTTGGTTCAATAATGTTCTTTCGACGACTCAGGCCTCAAAGAGCCATATTCCTCCGCCGTCATCGTCGGTGGTATTCCAATCGGCAAACAGAAGCAGGGACGTAGAATCTCTGTACGCGTCTGATCATCAAGGTCTGGTTCAAACGAGCATGATGATGATGAATATGGGTAATAGCAGTTTCGCTTCTCTTCATGATTGGTCTCAAAACTCTCTCTGGAATACCGTAAGCCCAACTTCCATTGGAGACAATTCTGAGAATACCGGTAACAATTATGACAATAGTAATGATCATAACGCTAAAGCCGGATCATCATCTTCTCTGAGTGGAAATCAATGGCCTGATGACCTACCAGGGTTTGGCCCTCCTCCATGA 933 0.5005 MNVQEGGDGGGGGEVNNQVQLQPLQPQRCPRCDSVNTKFCYYNNYSLSQPRYFCKTCKRYWTHGGSLRNIPIGGGCRKGKRTKASSSASSSSTALQLMSRPQQLQQPWLQEAIPTQPNLMMSPPRVLVGRSPAVKAAPPEVPSISSNYQGGGYLSSLAAIHSQNPLSQPLFDLSSLNLGPSNLGLHPWFNNVLSTTQASKSHIPPPSSSVVFQSANRSRDVESLYASDHQGLVQTSMMMMNMGNSSFASLHDWSQNSLWNTVSPTSIGDNSENTGNNYDNSNDHNAKAGSSSSLSGNQWPDDLPGFGPPP 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g0788 310 Pfam Dof domain, zinc finger 26 81 IPR003851 GO:0003677|GO:0006355
Lele35g0788 310 ProSiteProfiles Zinc finger Dof-type profile. 27 81 IPR003851 GO:0003677|GO:0006355
Lele35g0788 310 MobiDBLite consensus disorder prediction 82 100 - -
Lele35g0788 310 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 20 258 IPR045174 GO:0003700|GO:0006355
Lele35g0788 310 MobiDBLite consensus disorder prediction 72 100 - -
Lele35g0788 310 ProSitePatterns Zinc finger Dof-type signature. 29 65 IPR003851 GO:0003677|GO:0006355
Lele35g0788 310 MobiDBLite consensus disorder prediction 264 310 - -
Lele35g0788 310 MobiDBLite consensus disorder prediction 264 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g0788 Lele-ChrLele35 6280326 6281258 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g0788 28 93 C2C2-Dof Transcription Factor Family AT5G60200 74.242 1.85e-33 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lele35g0788 zf-Dof 3e-32 No_clan