Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g0787 ATGGCTTCTTCTTCTTCTTCTGCCTCTGCTCATCATCAAAGAGTTATGGAAAAACCAAACCAAGAACTTCTTCAACAGAAGCAAGAAGCTCTTAAGTGCCCTCGATGTGACTCATCAAACACCAAGTTCTGTTACTACAACAATTACAGCTTGTCTCAGCCTAGACATTTCTGTAAAGCCTGCAAACGATACTGGACTCGTGGAGGTACCTTAAGGAATGTTCCTGTTGGTGGAGGTTGCAGAAAAAACAAGCGTGTTAAGCGTCCTTCTTCTACGTCAGCTTCTTCAGAAACTCATAATATTACTGCTAATCCTTCTTCTTCTGCCAGTGTCTCAGCTGTTTCAAACCCTCCTTCATCACAATCTCAGATCGATCCTTTATTTTATGGCATGAATCTTCCGGTGTTTCCAAGGTTCAATTCCAGTACTTCTGGGTTTGATCATCTTCAACCTCATCAGGTGAATTATTCCCTTGGATTGGATTTCACTGATATTAATGGTTATCGAAATGGGTTTTCTTCTACAAATCATCATACACTTCTTTCAAGGTATAGCAGCTCTTCGATCTTTGATCATTCTTCTTCTTCAACATCTATAACCACATCCAGTCCTATTATGGCTTCACTGTTAAGCCCTACGAATCTGCATCAGCAACAAAAGTTCATCAATGGTGGTGGGGCTAATAACAGTGCTTTTCAGGGTTTCACAGATAATAATCATAACAACAGCACGAGAACTGAGGCAGAGATGGTTGCTCTAAAAGAAGTGAAATCTGCGGTGGTGGAAGATGATAACAGGTTTCTGGGGTGGCAAAATAACCAGATCGATCATCATCAAGCAACAGGCTTGTCTGATCCTTCATCACTTTACTGGAACGCTGCAACAGTTTTGGGTTCTACTTCTTGGAATGATCAAACCAATAATATTGGTCCTCATCAGTCACTTCTCTCATCTGATCTACAATAA 966 0.4079 MASSSSSASAHHQRVMEKPNQELLQQKQEALKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRKNKRVKRPSSTSASSETHNITANPSSSASVSAVSNPPSSQSQIDPLFYGMNLPVFPRFNSSTSGFDHLQPHQVNYSLGLDFTDINGYRNGFSSTNHHTLLSRYSSSSIFDHSSSSTSITTSSPIMASLLSPTNLHQQQKFINGGGANNSAFQGFTDNNHNNSTRTEAEMVALKEVKSAVVEDDNRFLGWQNNQIDHHQATGLSDPSSLYWNAATVLGSTSWNDQTNNIGPHQSLLSSDLQ 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g0787 321 MobiDBLite consensus disorder prediction 76 118 - -
Lele35g0787 321 ProSitePatterns Zinc finger Dof-type signature. 33 69 IPR003851 GO:0003677|GO:0006355
Lele35g0787 321 ProSiteProfiles Zinc finger Dof-type profile. 31 85 IPR003851 GO:0003677|GO:0006355
Lele35g0787 321 Pfam Dof domain, zinc finger 29 85 IPR003851 GO:0003677|GO:0006355
Lele35g0787 321 MobiDBLite consensus disorder prediction 301 321 - -
Lele35g0787 321 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 17 214 IPR045174 GO:0003700|GO:0006355
Lele35g0787 321 MobiDBLite consensus disorder prediction 89 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g0787 Lele-ChrLele35 6269702 6270667 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g0787 31 139 C2C2-Dof Transcription Factor Family AT1G28310 63.025 4.75e-38 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lele35g0787 zf-Dof 1.3e-33 No_clan