Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g1108 ATGGGTCTTGTGACGAATTCTAGAGGCTTGAGAACGGAGGCGGCCCATGAAGGCTTACCGGTTTGGACAACAGCGGTTCCCAGGAGGAAATGGGGTAATTTGATGCCTCTGTTTGCAATTTTCGTGGTCATTGCAGAGGTCGCCTTCTTGAGCAGGCTTGATATGGCGAAGAACGCTGCTATGGTCGGTACCGTCGCTGACTTGTTCTACGGGTCTCGTGAAGAAGCCACATTCGATGATTTAGCGTTTGATATATTGGGTAATTCAAAATCTGAGAGCTTTGAGGAATGGTTGGAGAGGGAGGATGCTGTGACATATTCAAGGAATTTTACGTCAGAACCTATTTTGGTTGTTGGAGTTGTGCAGGAGGAGATATCTTGTTCTTTGGGATGCAAGTTTGGTTCAGATGAAGGCAGGGCCCCTGATGCTTCATTTGGTACTCCTGCACGAGATGGAATGGTTCATATTCGACGATCAATGGAATCAACTACATATTTTCCAGATAGCAAAATTGCAGTGGCACGACGGTGGTTGGGTATTTTTCCTGGGCTGAGTATGACATCATGGCGCCACTGCAACCAAAAACCGAAAGTGCTCTTGCAGCAGCATTCATTTCCAACAGTGGTGCAACAAATTTTCGGTTGCAAGCTCTCAGAGGCACTTGAAAACTTGAACGTCAAGATTGATACTTATGGTGGTTGCCATAGGAACCGTGATGAAAATGGTATGTGTTTCTCAAATTTGAATCGCGGCCTTATGGACAAAGTGGAAGCTCTGAAGCGCTACAAATTTAGCTTAGCATTTGAAAATTCCAATGTGGAGGATTATGTGACTGAAAAATTCTTTCAATCCCTGGCTGGATCTGTCCCCGTGGTTGTCGGTGCTCCAAATATTCAAGATTTTGCTCCTTCCCCTGGTTCCTTTTTATATATAAAACAGCTAAAAGATGTTGAGTCTGGCTACTTGACTCTGGAGGCTTTGAAGTCTGCTGTTTTCTCAAAGTTCACATCCCTGAATCATGTACCCACTTGGAGGTACGAGAGACCTGAAAGCATAAGAGGAAGCGATGAATTGAAAATTTACAGAATATATCCCCTTGGCATGAGCCAGAGACAAGCTCTTTATTCCTTCAGCTTTAAAGGGGACGATGATTTTAGGAGTTACCTGGAAAGAAATCCTTGTGCCAAGTTTGAAGTCATATTTGTTTAG 1209 0.4409 MGLVTNSRGLRTEAAHEGLPVWTTAVPRRKWGNLMPLFAIFVVIAEVAFLSRLDMAKNAAMVGTVADLFYGSREEATFDDLAFDILGNSKSESFEEWLEREDAVTYSRNFTSEPILVVGVVQEEISCSLGCKFGSDEGRAPDASFGTPARDGMVHIRRSMESTTYFPDSKIAVARRWLGIFPGLSMTSWRHCNQKPKVLLQQHSFPTVVQQIFGCKLSEALENLNVKIDTYGGCHRNRDENGMCFSNLNRGLMDKVEALKRYKFSLAFENSNVEDYVTEKFFQSLAGSVPVVVGAPNIQDFAPSPGSFLYIKQLKDVESGYLTLEALKSAVFSKFTSLNHVPTWRYERPESIRGSDELKIYRIYPLGMSQRQALYSFSFKGDDDFRSYLERNPCAKFEVIFV 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g1108 402 Pfam Glycosyltransferase family 10 (fucosyltransferase) C-term 217 328 IPR001503 GO:0006486|GO:0008417|GO:0016020
Lele34g1108 402 Gene3D - 207 338 IPR038577 -
Lele34g1108 402 PANTHER ALPHA- 1,3 -FUCOSYLTRANSFERASE 153 319 IPR001503 GO:0006486|GO:0008417|GO:0016020
Lele34g1108 402 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 164 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g1108 Lele-ChrLele34 19727234 19730117 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g1108 322 402 Xyloglucan Fucosyltransferase1 AT1G49710 58.025 1.41e-26 109