Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g0808 ATGGTACTCGTCCCTCGAAACACTAAAGAATGGCCACAGCAGGAGATAATAGATGATCAAAAGGCGTCGTCGAAGATGATGGCTTCTTCTTCTTCTTCTTCTGCCTCTGCTCATCATCAAAGGGTTATGGAAAAACCAAACCAAGAACTTCTTCAACAGAAACAAGAAGCTCTTAAGTGCCCTCGATGTGACTCATCAAACACCAAGTTCTGTTACTACAACAATTACAGCTTGTCTCAGCCTAGACATTTCTGTAAAGCCTGCAAACGATACTGGACTCGTGGAGGTACCTTAAGGAATGTTCCTGTTGGTGGAGGCTGCAGAAAAAACAAGCGTGTTAAGCGTCCTTCTTCTACGTCAGCTTCTTCAGAAACTCATAATTTTACTGCTAATCCTTCTTCTTCTGCCAGTGTCTCAGCTGTTTCAAACCCTCCTTCATCACAATCTCAGATCGATCCTTTATTTTATGGCATGAATCTTCCGGCGTTTCCAAGGTTCAATTCCAGTACTTCTGGGTTTGATCATCTTCAACCTCATCTGATGAATTATTCCCTTGGACTGGATTTCACTGATATTAATGGTTATCGAAATGGGTTTTCTTCTACAAATCACCATACACTTCTTTCAAGTTATAGCAGCTCTTCGATCTTTGCTAATTCTTCTTCTTCAACATCTATAACTACATCCAGTCCTATTATGGCTTCACTGTTAAGCCCTACGAATCCGCATCAGCAACAAAAGTTCATCAATGGTGGTGGGGCTAATAACAGTGCTTTTCAGGGTTTCACAGATAATAATCATAACAACAGCACGAGAACTGAGGCAGAGATGGTTGCTTTAAAAGAAGTGAAATCTGCGGTGGTGGAAGATGATAACAGGTTTCTGGGGTGGCCAAATAACCAGATCGATCATCATCAAGCAACAGGCTTGTCTGATCCTTCATCCCTTTACTGGAACGCGGCAACAGCTTTGGGTTCTGCTACTTGGAATGATCAAACCGATAATATTGGTCCTCATCAGTCACTTCTCTCATCTGATCTACAATAA 1047 0.4183 MVLVPRNTKEWPQQEIIDDQKASSKMMASSSSSSASAHHQRVMEKPNQELLQQKQEALKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRKNKRVKRPSSTSASSETHNFTANPSSSASVSAVSNPPSSQSQIDPLFYGMNLPAFPRFNSSTSGFDHLQPHLMNYSLGLDFTDINGYRNGFSSTNHHTLLSSYSSSSIFANSSSSTSITTSSPIMASLLSPTNPHQQQKFINGGGANNSAFQGFTDNNHNNSTRTEAEMVALKEVKSAVVEDDNRFLGWPNNQIDHHQATGLSDPSSLYWNAATALGSATWNDQTDNIGPHQSLLSSDLQ 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g0808 348 Pfam Dof domain, zinc finger 56 112 IPR003851 GO:0003677|GO:0006355
Lele33g0808 348 ProSitePatterns Zinc finger Dof-type signature. 60 96 IPR003851 GO:0003677|GO:0006355
Lele33g0808 348 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 40 240 IPR045174 GO:0003700|GO:0006355
Lele33g0808 348 MobiDBLite consensus disorder prediction 103 145 - -
Lele33g0808 348 MobiDBLite consensus disorder prediction 116 145 - -
Lele33g0808 348 ProSiteProfiles Zinc finger Dof-type profile. 58 112 IPR003851 GO:0003677|GO:0006355
Lele33g0808 348 MobiDBLite consensus disorder prediction 20 43 - -
Lele33g0808 348 MobiDBLite consensus disorder prediction 235 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g0808 Lele-ChrLele33 7354640 7355914 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g0808 58 166 C2C2-Dof Transcription Factor Family AT1G28310 63.025 1.23e-37 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lele33g0808 zf-Dof 1.4e-33 No_clan