Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g1063 ATGCTTCACTCTCATGTGTCTTTGGATGTGAGCAGGAAGATTCAATTTATCATATATTTTCCTTATGATCCCTGTATTAGATGGCGTCAATTGGACTTCAGCAATATTCAGGACTGGCTGAACTCTTTCTTAAATGAGATGCATTGTATCATCAACAAGGGTGGAGCATTGGTTGAGTTCATCTGGAAATGTACTTCAACTCCGGGACTTCAATTCCTATCCGAATCATTCGCCTTCGAGCAGGCGACATCTTGGCGAGCGCCGTCTCCTCTCGTATTTCTTCTCGCTGCCATCCTCTCCGTCTCTGCCGCTCCCAAAAGTCGCTTAGGTTCCGTTCCAATGGCTTCAGAGAAGAAGCTGGCGAACCCTATGAGGGAAATCAAGGTCCAGAAGCTAGTTCTCAATATCTCAGTGGGTGAGAGTGGAGATCGTCTCACCAGAGCTGCTAAGGTGTTGGAGCAGCTTAGTGGCCAAACCCCAGTATTCTCTAAAGCAAGGTATACTGTTCGTTCCTTTGGCATCAGAAGGAATGAAAAGATTGCATGCTATGTCACTGTAAGAGGTGACAAGGCAATGCAGCTTTTGGAAAGTGGTCTGAAGGTGAAGGAATATGAACTGCTGAGAAGAAACTTCAGTGATACAGGGTGTTTTGGCTTCGGCATTCAGGAGCATATTGATTTGGGAATCAAGTATGATCCATCCACTGGTATCTATGGAATGGACTTTTATGTTATTTTGGAGCGCCCCGGTTACCGTGTGGGACGTCGCCGCAGGTGCAAGTCACGTGTTGGGATCCAGCACCGCGTTACAAAAGATGATGCCATGAAGTGGTTCCAAGTGAAATATGAAGGAGTGATCCTGAACAAATCCCAAACAATTGTTGGTTAG 888 0.4595 MLHSHVSLDVSRKIQFIIYFPYDPCIRWRQLDFSNIQDWLNSFLNEMHCIINKGGALVEFIWKCTSTPGLQFLSESFAFEQATSWRAPSPLVFLLAAILSVSAAPKSRLGSVPMASEKKLANPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFYVILERPGYRVGRRRRCKSRVGIQHRVTKDDAMKWFQVKYEGVILNKSQTIVG 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g1063 295 FunFam 60S ribosomal protein L11 115 287 - -
Lele32g1063 295 Pfam ribosomal L5P family C-terminus 179 277 IPR031309 -
Lele32g1063 295 Gene3D - 114 290 IPR022803 -
Lele32g1063 295 Pfam Ribosomal protein L5 122 175 IPR031310 -
Lele32g1063 295 SUPERFAMILY RL5-like 122 286 IPR022803 -
Lele32g1063 295 ProSitePatterns Ribosomal protein L5 signature. 152 168 IPR020929 GO:0003735|GO:0005840|GO:0006412
Lele32g1063 295 PANTHER 60S RIBOSOMAL PROTEIN L11-RELATED 109 289 IPR002132 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g1063 Lele-ChrLele32 8026772 8032363 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g1063 114 295 Cytoplasmic Ribosomal Protein Gene Family AT5G45775 95.055 4.75e-129 363