Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0191 ATGGATCCTTCTAGTGGACACCACCAGCAAATGCCTTCCCTGGAGAATATGTTGGCTTGTTCAAAGGCACAGAATCAAGCAGAGAGAAAGCCAAGGCCTCAGCCTGAACAAGCCCTGAAATGTCCAAGATGCGACTCTACCAACACCAAATTCTGTTACTACAATAATTACAGTCTCTCCCAGCCAAGATATTTCTGCAAGTCTTGCAGGAGATATTGGACCAAAGGAGGAACTCTGAGGAATGTTCCAGTGGGTGGAGGCTGCAGGAAGAACAAAAGGTCTTCGTCATCTCCTTCATCGTCAAAAAGGGCTGAAGATCAATCACTCACAGCAAATTCTAATGCCCTCATCACTACCTTCCCTCCGTTATCATATGACCCCAATGACCTCACTCTTGCACTAGCTAGACTCCAGAAGCAATCTTGCGGACAATTGGGCTTTGATGACCATGATTTCTCCGTCATGGGAAATTCTCTCGGAAACCTCTCTTCCACAAACCCAGGATTTTTAGACGCTCTTCTTAATGGTGGATTCCTCGAAACTCAGAGTAGTAATCTTCAGAATCTGTACTATGGATATGGAAATGGGGACTTGGGAGAGGTGGACAATTGCAGCAACAGTAATAATGCTTGTGGGATTACTGGAGAGATGATGCTTCCGTTTGATCAAGAAGTAAGTAATGCCACTACTCATGCAGTCACTGTCACTACCATGAAGCAAGAAATCTGCAATGGCAGAGAACAAGGTGATTCTAAGGTTTTGTGGGGTCTTCCATGGCAGCTTAATGGAGACACAACCATGGGTGAAATTGATTCAGGGAGGGAAAACTGGAACAGTCTCACGTCGTCATCTTGGCACGGGCTTCTTAATAGTCCCCTAATGTAA 885 0.4531 MDPSSGHHQQMPSLENMLACSKAQNQAERKPRPQPEQALKCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRKNKRSSSSPSSSKRAEDQSLTANSNALITTFPPLSYDPNDLTLALARLQKQSCGQLGFDDHDFSVMGNSLGNLSSTNPGFLDALLNGGFLETQSSNLQNLYYGYGNGDLGEVDNCSNSNNACGITGEMMLPFDQEVSNATTHAVTVTTMKQEICNGREQGDSKVLWGLPWQLNGDTTMGEIDSGRENWNSLTSSSWHGLLNSPLM 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0191 294 MobiDBLite consensus disorder prediction 1 40 - -
Lele32g0191 294 Pfam Dof domain, zinc finger 37 93 IPR003851 GO:0003677|GO:0006355
Lele32g0191 294 ProSiteProfiles Zinc finger Dof-type profile. 39 93 IPR003851 GO:0003677|GO:0006355
Lele32g0191 294 MobiDBLite consensus disorder prediction 90 108 - -
Lele32g0191 294 MobiDBLite consensus disorder prediction 84 108 - -
Lele32g0191 294 ProSitePatterns Zinc finger Dof-type signature. 41 77 IPR003851 GO:0003677|GO:0006355
Lele32g0191 294 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 22 193 IPR045174 GO:0003700|GO:0006355
Lele32g0191 294 MobiDBLite consensus disorder prediction 1 31 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0191 Lele-ChrLele32 1160251 1161673 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0191 37 294 C2C2-Dof Transcription Factor Family AT2G28510 41.758 9.82e-53 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lele32g0191 zf-Dof 5.9e-34 No_clan