Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0136 ATGGTTTTCTCTTCTATTCCAGTTTATTTAGATCCTCCCAATTGGCAGCCGCAACAAAATCATCAGCAATCAAATGGAACTGAAAGCAATCAGCTACTTCCTCATGCTGGTGGTTGCGGTGCAGGTTCCGTCCGGCCTGGTTCGATGGCTGACCAGGCCCGGCTAGCGAAGCTACCTCCTCCCGAGGCAGCCCTAAAGTGTCCCCGTTGCGAATCCACCAACACAAAATTTTGCTACTTCAACAATTACAGCCTGTCTCAACCTCGTCACTTCTGCAAGACATGTCGGCGATACTGGACAAGAGGCGGCGCTCTCAGGAACGTTCCTGTCGGAGGCGGATGTCGAAGAAACAAGAAGAGCAAAAGGAGCCGCTCCAAATCTCCGTCAGCCGCACCCACCACCGCTGACAGCAAGCAGACCCTTCTCCCCAACGCCGCCACCAGTGCAATCGGCTCCGGCAGTGCCACAACCGAGCTGATCGGTCAGTTGCAGCAACCTTCCAACTTGCCATTCATGGCTTCTTTACAAAACCTGGGCGGCCGTTACGGCTTAGGGAACATGGGCCTGAGCTTGCGCGACATTTTAGCCCAGACTGAGCCCATGGGCTTTCAAATCGGAGGAGTAGACAACCAGTGGCGCTCACAGCAGCAATTCCCTAATTTCATGAATGGGTTCCAGTCAAATGATTCAGTTGATTCTTCTTACCAGTTTCAAAGCGAGAGCATGGCCGTGTTACAGAATGGAGTGATCGGAGATTCAAGTTCTAGGGTTGCAACTCAGCTACCACCTGTTAAATTGGAAGAGAGCGGAGCCCTAAATTTGTCGAGACCGCCCATAGGTAATAATAATAGTAATAATCAGTACTATTCATGGACTGATTTATCGGGTCTTGCTTCTTCTTCCACTAGCCACATCTTGTTTTGCATGGGAGTTCGTCTCTTTTGTACTATATGGGTTGAGGCATCAGAAAAGTTCGCTTCTATATATAGGGTTTCTGCAATTATGGGGTACGATCCTCAGAAGGGTTCGGAAATTCATGCACGCTTCATCTCCTCAAAGTCGCTCTTTCTCTTTCATTCTGCTTAA 1086 0.4945 MVFSSIPVYLDPPNWQPQQNHQQSNGTESNQLLPHAGGCGAGSVRPGSMADQARLAKLPPPEAALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKKSKRSRSKSPSAAPTTADSKQTLLPNAATSAIGSGSATTELIGQLQQPSNLPFMASLQNLGGRYGLGNMGLSLRDILAQTEPMGFQIGGVDNQWRSQQQFPNFMNGFQSNDSVDSSYQFQSESMAVLQNGVIGDSSSRVATQLPPVKLEESGALNLSRPPIGNNNSNNQYYSWTDLSGLASSSTSHILFCMGVRLFCTIWVEASEKFASIYRVSAIMGYDPQKGSEIHARFISSKSLFLFHSA 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0136 361 MobiDBLite consensus disorder prediction 12 32 - -
Lele32g0136 361 MobiDBLite consensus disorder prediction 110 137 - -
Lele32g0136 361 Pfam Dof domain, zinc finger 64 119 IPR003851 GO:0003677|GO:0006355
Lele32g0136 361 ProSiteProfiles Zinc finger Dof-type profile. 65 119 IPR003851 GO:0003677|GO:0006355
Lele32g0136 361 ProSitePatterns Zinc finger Dof-type signature. 67 103 IPR003851 GO:0003677|GO:0006355
Lele32g0136 361 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 36 233 IPR045174 GO:0003700|GO:0006355
Lele32g0136 361 MobiDBLite consensus disorder prediction 12 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0136 Lele-ChrLele32 773188 776128 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0136 34 307 C2C2-Dof Transcription Factor Family AT3G55370 42.617 1.17e-50 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lele32g0136 zf-Dof 1.4e-32 No_clan