Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g1406 ATGGTTTTCTCTTCTATTCCAGTCTATTTAGATCCTCCCAATTGGCAGCCGCAACAAAATCATCAGCAATCAAATGGAACTGAAAGCACTCAGCTGCTTCCTCATGCTGCTGGTTGCGGTGCAGGTTCGTTCCGGCCTGGTTCGATGGCCGACCGGGCCCGGCTAGCGAAGCTACCACCTCCCGAGGCAGCCCTAAAGTGTCCCCGTTGCGAATCAACCAACACAAAATTTTGCTACTTCAACAATTATAGCCTGTCTCAACCTCGTCACTTCTGCAAGACATGTCGGCGATACTGGACAAGAGGCGGCTCTCTCAGGACCGTTCCGGTTGGAGGAGGATGCCGAAGAAACAAGAAGAGCAAAAGGAGCCGCTCAAAGTCTCCGTCAGCCGCACCCACCACCGCTGACAACAAGCAGACCCTTCTCCCCAGCGCCGCCACCACCGAGCTGATCGGTCAGTTGCAGCAACCTTCCAACTTGCCATTCACGGCTTCTTTACAAAACCTGGGCGGCCGTTACGGCTTAGGAAACATGGGCCTGAGCTTGCGCGACATTTTAGCCCAGACTGAGCCCATGGGCTTTCAAATCGGAGGAGTAAACAACCAGTGGCGCTCACAGCAATTCCCTAATTTCATGAATGGGTTCGAGTCAAATAATTCAGTTGATTCTTCTTACCAGTTTCAAAGCGAGAGCATGGCCGTAGTACAGAACGGAGTGATCGGAGATTCAAGCTCTAGGGTTGCAACTCAGCTGCCATCTGTTAAATTTGAAGAGACTGGAGCCCTAAATTTTTCAAGAGCGCCCATAGGTAATAATAATAGTAATAATCAGTTCTATTCATGGACTGATTTATCGGGTGTTGGTTCTTCTTCCACTAGCCACATCTTGAAAAACACTCTTAACACAAAGCCAACGTTGGCTTGGTTCGGATATGGATATTCTTTGTCATGA 951 0.4942 MVFSSIPVYLDPPNWQPQQNHQQSNGTESTQLLPHAAGCGAGSFRPGSMADRARLAKLPPPEAALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGSLRTVPVGGGCRRNKKSKRSRSKSPSAAPTTADNKQTLLPSAATTELIGQLQQPSNLPFTASLQNLGGRYGLGNMGLSLRDILAQTEPMGFQIGGVNNQWRSQQFPNFMNGFESNNSVDSSYQFQSESMAVVQNGVIGDSSSRVATQLPSVKFEETGALNFSRAPIGNNNSNNQFYSWTDLSGVGSSSTSHILKNTLNTKPTLAWFGYGYSLS 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g1406 316 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 36 226 IPR045174 GO:0003700|GO:0006355
Lele31g1406 316 Pfam Dof domain, zinc finger 64 119 IPR003851 GO:0003677|GO:0006355
Lele31g1406 316 MobiDBLite consensus disorder prediction 110 138 - -
Lele31g1406 316 ProSiteProfiles Zinc finger Dof-type profile. 65 119 IPR003851 GO:0003677|GO:0006355
Lele31g1406 316 MobiDBLite consensus disorder prediction 12 31 - -
Lele31g1406 316 ProSitePatterns Zinc finger Dof-type signature. 67 103 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g1406 Lele-ChrLele31 19756077 19757758 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g1406 34 281 C2C2-Dof Transcription Factor Family AT3G55370 43.636 1.71e-48 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lele31g1406 zf-Dof 4.5e-32 No_clan