Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g1347 ATGGATCCTTCCAGTGGACAACACCAGCAAATGCCTAGCCAGTCGTCACAGGAGAATATGTTGGCTTGTTCAAAGTCACAGGATCAAGTAGAAAGAAAGCCAATACCTCAGCCTGAACAAGCCCCGAAATGTCCAAGATGCGACTCTACCAACACCAAATTCTGTTACTACAACAATTACAGTCTCTCCCAACCCAGATATCTCTGCAAATCTTGCAGGAGATATTGGACCAAAGGAGGAACTCTGAGGAATGTTCCAGTGGGTGGAGGGTACAGGAAGAACAAAAGGTCATCCTCATCTTCTTCTTCATCATCAAGAAGGGCTCGAGATCAATCGCTCACGCCAAATTCAAATCCCCTCATCGTTACCCTCCCTCCATTCTCATATGACCCCAATGACCTCCCTCTTGCACTGGCTAGACTCCAGAAGCAATCTTGCGGACAACTGGGCTTTGATGACCATGATTTTTCCGTCCTGGGAAATTCTCTTGGAAACCTCTCTTCCGCAAACTCTGGATTTCTCGATGCTCTTCGCAGTGGATTCCTTGAAACGCAGAGTAGTAATCTTCAGAATCTGTACTATGGATATGGAAATGGGGACTTGGGAGAGACGGACAATGGAAGTAACAGTATTAATGCTTGTGGGATTACTGGGGAGATGGTGCTTCCATTTGATCAAGAAGCGAGTAATGCCACTACTCAAGCAGTCACTGTCACTACCATGAATCAAAAAATCTGCAATGGCGGCGGAGAACAAGGTGATACTAAGGTTTTGTGGGGTCTTCCATGGCAGCTCAATGGAGACACAAACATGGGTGAAATTGATTCAGGGAGGGCAAATTGGAACAGTCACACGTCATCTTGGCACGGGCTTCTTAATAGTCCCCTAATTTAA 894 0.4609 MDPSSGQHQQMPSQSSQENMLACSKSQDQVERKPIPQPEQAPKCPRCDSTNTKFCYYNNYSLSQPRYLCKSCRRYWTKGGTLRNVPVGGGYRKNKRSSSSSSSSSRRARDQSLTPNSNPLIVTLPPFSYDPNDLPLALARLQKQSCGQLGFDDHDFSVLGNSLGNLSSANSGFLDALRSGFLETQSSNLQNLYYGYGNGDLGETDNGSNSINACGITGEMVLPFDQEASNATTQAVTVTTMNQKICNGGGEQGDTKVLWGLPWQLNGDTNMGEIDSGRANWNSHTSSWHGLLNSPLI 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g1347 297 ProSitePatterns Zinc finger Dof-type signature. 44 80 IPR003851 GO:0003677|GO:0006355
Lele31g1347 297 MobiDBLite consensus disorder prediction 1 46 - -
Lele31g1347 297 MobiDBLite consensus disorder prediction 1 33 - -
Lele31g1347 297 Pfam Dof domain, zinc finger 40 96 IPR003851 GO:0003677|GO:0006355
Lele31g1347 297 MobiDBLite consensus disorder prediction 86 120 - -
Lele31g1347 297 MobiDBLite consensus disorder prediction 93 120 - -
Lele31g1347 297 ProSiteProfiles Zinc finger Dof-type profile. 42 96 IPR003851 GO:0003677|GO:0006355
Lele31g1347 297 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 16 200 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g1347 Lele-ChrLele31 19386166 19387581 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g1347 40 297 C2C2-Dof Transcription Factor Family AT2G28510 42.909 2.64e-53 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lele31g1347 zf-Dof 9e-33 No_clan