Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0204 ATGGGAACTGGAGAATACGAGGCTGAGAAATCGCAGGTTGGGGAGGTGCGAGAGAGGACAAAGAGAGCAGGGGTAGTGGAGGAGGGATCTCATTTGATTGTATGGATGGATCCTTCCAGTGGACAACACCAGCAAATGCCTAGCCAGTCGTCACAGGAGAATATGTTGGCTTGTTCAAAGTCACAGGATCAAGCAGAGAAAAAGCCAAGACCTCAGCCCGAACAAGCCCTGAAATGTCCAAGATGCGACTCCACCAACACCAAATTCTGTTACTACAACAATTACAGTCTCTCCCAACCCAGATATTTCTGCAAATCTTGCAGGAGATATTGGACCAAAGGAGGAACTCTGAGGAATATTCCAGTGGGTGGAGGGTGCAGGAAGAACAAAAGGTCCTCCTCATCTTCTTCATCATCAAGAAGGGCTCAAGATCAATCGCTCACACCAAACTCCAATCCCCTCATCGCTACCCTCCCTCCATTCTCATATGACCCCAATGACCTCACTCTTGCACTGGCTAGACTCCAGAAGCAATCTTGCGGACAACTGGGCTTTGATGACCATGATTTTTCCGTCCCGGGAAATTCTCTTGGAAACCTCTCTTCCGCAAACACTGGATTTCTTGATGCTCTTCGCAGTGGATTCCTTGAAACGCAACGTAGTAATCTTCAGAATATGTACTATGGATATGGAAATGGGGACTTGGGAGAGGTGGACAATGGAAGTAACAGTAATGCTTGTGGGATTACTGGAGAGATGATGCTTCCATTTGATCAAGAAGTGAGTAATGCCACTACTCAAGCAGTCACTGACACTACCATGAAGCAAGAAATCTGCAATGGCGGCAGAGAACAAGGTGATACTAAGGTTTTGTGGGGTCTTCCATGGCAGCTCGAGGGAGACACAAACATGGGTGATATTGATTCAGGGAGTGCAAACTGGAACAGTCACACGTCATCTTGGCACGGGCTTCTTAATAGTCCCCTAATTTAA 993 0.4713 MGTGEYEAEKSQVGEVRERTKRAGVVEEGSHLIVWMDPSSGQHQQMPSQSSQENMLACSKSQDQAEKKPRPQPEQALKCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNIPVGGGCRKNKRSSSSSSSSRRAQDQSLTPNSNPLIATLPPFSYDPNDLTLALARLQKQSCGQLGFDDHDFSVPGNSLGNLSSANTGFLDALRSGFLETQRSNLQNMYYGYGNGDLGEVDNGSNSNACGITGEMMLPFDQEVSNATTQAVTDTTMKQEICNGGREQGDTKVLWGLPWQLEGDTNMGDIDSGSANWNSHTSSWHGLLNSPLI 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0204 330 ProSiteProfiles Zinc finger Dof-type profile. 77 131 IPR003851 GO:0003677|GO:0006355
Lele29g0204 330 MobiDBLite consensus disorder prediction 35 78 - -
Lele29g0204 330 ProSitePatterns Zinc finger Dof-type signature. 79 115 IPR003851 GO:0003677|GO:0006355
Lele29g0204 330 MobiDBLite consensus disorder prediction 128 157 - -
Lele29g0204 330 MobiDBLite consensus disorder prediction 1 23 - -
Lele29g0204 330 MobiDBLite consensus disorder prediction 37 61 - -
Lele29g0204 330 MobiDBLite consensus disorder prediction 122 158 - -
Lele29g0204 330 Pfam Dof domain, zinc finger 75 131 IPR003851 GO:0003677|GO:0006355
Lele29g0204 330 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 51 233 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0204 Lele-ChrLele29 1182805 1184733 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0204 75 330 C2C2-Dof Transcription Factor Family AT2G28510 42.336 7.74e-53 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lele29g0204 zf-Dof 7.7e-34 No_clan