Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1103 ATGGACACAGCTCAGTGGGCACAGGGGAATATTGGAGTGGTTAAACCTATGGAATTAGGTTCAAATCCAAAGCCTGGTATGTTGGAGAAGAAGGCAAGGCCTCAGAAAGATCAAGCTTTGAACTGTCCAAGGTGCAATTCAACCAACACCAAATTCTGTTACTACAACAACTATAGCCTCTCTCAGCCCAGATACTTTTGTAAGACTTGTCGAAGGTATTGGACTGAAGGTGGCTCTCTCAGGAATGTTCCTGTTGGTGGAGGTTCCAGAAAGAACAAGAGACCTTCTTCTTCTTCGTCTTCTACTACTTCTTCAACAACATCAGCAACAGCAAAGAAGCTTCCAGAACCTTCTCCTCCTCATCATCATCAGAACAAGATCCACCAAGCCCAAGATCTTAACTTGGCATACCCAACACCACCGCCATCAATATCATCACTCCCTCCACAACAACAACCTGAGATTTCTGGAAGTTCTAATAATAATTCTTCGAGGGTTTTGATGAATTCCTTTATGCCCATGTCGGTTTCATCAGATGCTGCAAGCATGATGCATCATCATCATCACGGGTTTCCTTTGGAGTTCAAGCCTCAGCATCATCATCAAGGGCTTCATTTTAGCTTTGAGGGGTTTGAGAATAATGGGTTAATTGGAACTGGTATTCATCATCATCATCAGGGAATGCAGCAATTGGGTAATTCTGCTGGTGGTGCTGGTGCAAGGACGATCTTGTTCCCTATTGAAGAATTGAAGCACGTGCCAAGCACTACTACAAGCCATGAGTTAATTGATCAGCAAAATAATAGAGCAGGCAGCCATGGAGATCCAAGTGGGTTTTGGAATGGCATGCTAGGTGGAGGAGCATGGTAG 870 0.4425 MDTAQWAQGNIGVVKPMELGSNPKPGMLEKKARPQKDQALNCPRCNSTNTKFCYYNNYSLSQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRPSSSSSSTTSSTTSATAKKLPEPSPPHHHQNKIHQAQDLNLAYPTPPPSISSLPPQQQPEISGSSNNNSSRVLMNSFMPMSVSSDAASMMHHHHHGFPLEFKPQHHHQGLHFSFEGFENNGLIGTGIHHHHQGMQQLGNSAGGAGARTILFPIEELKHVPSTTTSHELIDQQNNRAGSHGDPSGFWNGMLGGGAW 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1103 289 Pfam Dof domain, zinc finger 37 94 IPR003851 GO:0003677|GO:0006355
Lele27g1103 289 MobiDBLite consensus disorder prediction 18 37 - -
Lele27g1103 289 ProSiteProfiles Zinc finger Dof-type profile. 40 94 IPR003851 GO:0003677|GO:0006355
Lele27g1103 289 MobiDBLite consensus disorder prediction 78 166 - -
Lele27g1103 289 MobiDBLite consensus disorder prediction 149 166 - -
Lele27g1103 289 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 29 196 IPR045174 GO:0003700|GO:0006355
Lele27g1103 289 MobiDBLite consensus disorder prediction 91 113 - -
Lele27g1103 289 ProSitePatterns Zinc finger Dof-type signature. 42 78 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1103 Lele-ChrLele27 18389175 18390669 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1103 1 289 C2C2-Dof Transcription Factor Family AT4G24060 37.677 3.87e-48 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lele27g1103 zf-Dof 1.5e-33 No_clan