Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0978 ATGGACACAGCTCAGTGGGCACAGGGGAATATTGGAGTGGTTAAACCTATGGAATTAGGTTCAAATCCAAAGCCTGCAGGTATGTTGGAGAAAAAGGCAAGGCCTCAGAAAGATCAAGCTTTGAACTGCCCAAGGTGCAATTCAACCAACACCAAATTCTGTTACTACAATAACTATAGCCTGTCTCAGCCCAGATACTTTTGTAAGACTTGTCGAAGGTATTGGACTGAAGGTGGCTCTCTCAGGAATGTTCCTGTTGGTGGAGGTTCCAGAAAGAACAAGAGACCTTCTTCTTCTTTATCATCTTCTACTACTTCAACAACATCAGCACCAGCATCAAATAAGCTTCCAGAACCTTCTCATCAGAACCCCAACAAGAGCCACCAAGCCCAAGATCTTAACTTAACATACCCAACACCACCACCATCGATATCATCACTCCCTCCACAACAACAACCTGAGATTTCTGGAAGTTCTAATAATTCTTCGAGGTGTTTGATGAATTCCTTGATGCCCATGTCGGTTTCATCAGATGCAAGCATGATGCATCATCATGGGTTTCCTTTGGAGTTCAAGCCTCAGCATCATCATCAAGGGCTCAATTTTAGCTTTGACGGGTTTGAGAATAATGGGTTAATCGCAAATGGTCTTCATCATCATCATCATCATCATCAGGGAATGCAATTGGGTAATTCTGCTACTGGTGGTGCTGTTGCAAGGACGATTTTGTTCCCTATTGAAGAATTGAAGCACGTGCCAAGCACTAGCACAAGTCATGAGTTAATTGATCAGCAAAATAATAGAGGAAGCAGTCATGGAGATCCAAGTGGGTTTTGGAATGGCATGTTAGGTGGAGGAGCATGGTAG 867 0.4337 MDTAQWAQGNIGVVKPMELGSNPKPAGMLEKKARPQKDQALNCPRCNSTNTKFCYYNNYSLSQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRPSSSLSSSTTSTTSAPASNKLPEPSHQNPNKSHQAQDLNLTYPTPPPSISSLPPQQQPEISGSSNNSSRCLMNSLMPMSVSSDASMMHHHGFPLEFKPQHHHQGLNFSFDGFENNGLIANGLHHHHHHHQGMQLGNSATGGAVARTILFPIEELKHVPSTSTSHELIDQQNNRGSSHGDPSGFWNGMLGGGAW 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0978 288 MobiDBLite consensus disorder prediction 92 140 - -
Lele26g0978 288 MobiDBLite consensus disorder prediction 79 166 - -
Lele26g0978 288 ProSitePatterns Zinc finger Dof-type signature. 43 79 IPR003851 GO:0003677|GO:0006355
Lele26g0978 288 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 30 212 IPR045174 GO:0003700|GO:0006355
Lele26g0978 288 MobiDBLite consensus disorder prediction 149 166 - -
Lele26g0978 288 Pfam Dof domain, zinc finger 38 95 IPR003851 GO:0003677|GO:0006355
Lele26g0978 288 ProSiteProfiles Zinc finger Dof-type profile. 41 95 IPR003851 GO:0003677|GO:0006355
Lele26g0978 288 MobiDBLite consensus disorder prediction 261 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0978 Lele-ChrLele26 6389137 6390687 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g0978 1 288 C2C2-Dof Transcription Factor Family AT4G24060 37.892 3.65e-49 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lele26g0978 zf-Dof 1.5e-33 No_clan