Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0915 ATGTTCGGTTGTGAATTCTCTGCTGCTGCTTCTGGTTCCAATCCTAAGCCATTCCCCAGGTGGCAGCCCGACCACGTGGAGCCGCCTTCCCCTTGCCCTCGCTGTGCTTCTTCCAACACCAAATTCTGTTACTACAACAACTACAGCTTGTCCCAGCCCAGGTACTTGTGTAAATCTTGCCGTCGCTACTGGACCAAAGGCGGCTTCCTCCGCAACGTCCCCGTCCGCCGTGGTTCCCGTAAATCCCGCCTTACTAAGACCCCCCGGCTCCCACCACCAAACCACCGTCTTTCCACCGACCATGCTCCTAATAATAACTCCGGCAAAGACTCCGACGCTGACACGTCCCGAGCCAAAGGGTCCGATATAGACATGGCCGTGGTCTTTGCTAATTACTTGAGCTCCGGTCATGATGATTCCAATAACGAGAACGACGCGCCTCAGCCGTCGGATCTGGTGGTAGATGGAGAGGGGCTTCTTCCTAGGGACGAGTCGGTGATGAGTGGGATTGAGGTGGAGTGGGAGAGCTTGTTAGGTGGTGGTGATGGAGAAGTGGTCCAAGATGTTTTCTGCTTGTCGGATGCGACCACATCGTCCTCGTCGTCTGTCATATGGCAACCACCTCTGATGCAGTTGCGGGAGGAGTTGGACAATCCCTTGCCCTTCAATTATGAGGTTGCTCAACTGCCTATAGCCGATTCCTGGAATTGGAATTCCTTCGATTTTCCTACTTTGCAGGAATTCTCATCAAGCTAG 756 0.537 MFGCEFSAAASGSNPKPFPRWQPDHVEPPSPCPRCASSNTKFCYYNNYSLSQPRYLCKSCRRYWTKGGFLRNVPVRRGSRKSRLTKTPRLPPPNHRLSTDHAPNNNSGKDSDADTSRAKGSDIDMAVVFANYLSSGHDDSNNENDAPQPSDLVVDGEGLLPRDESVMSGIEVEWESLLGGGDGEVVQDVFCLSDATTSSSSSVIWQPPLMQLREELDNPLPFNYEVAQLPIADSWNWNSFDFPTLQEFSSS 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0915 251 MobiDBLite consensus disorder prediction 75 120 - -
Lele26g0915 251 ProSiteProfiles Zinc finger Dof-type profile. 30 84 IPR003851 GO:0003677|GO:0006355
Lele26g0915 251 ProSitePatterns Zinc finger Dof-type signature. 32 68 IPR003851 GO:0003677|GO:0006355
Lele26g0915 251 MobiDBLite consensus disorder prediction 1 25 - -
Lele26g0915 251 Pfam Dof domain, zinc finger 30 83 IPR003851 GO:0003677|GO:0006355
Lele26g0915 251 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 25 140 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0915 Lele-ChrLele26 5889435 5890190 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g0915 21 147 C2C2-Dof Transcription Factor Family AT1G21340 48.889 3.87e-31 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lele26g0915 zf-Dof 3.3e-29 No_clan