Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0974 ATGGACACAGCTCAGTGGGCACAGGGGAATATTGGAGTGGTTAAACCTATGGAATTAGGTTCAAATCCAAAGCCTGGTATGTTGGAGAAGAAGGCAAGGCCTCAGAAAGATCAAGCTTTGAACTGTCCAAGGTGCAATTCAACCAACACCAAATTCTGTTACTACAACAACTATAGCCTCTCTCAGCCCAGATACTTTTGTAAGACTTGTCGAAGGTATTGGACTGAAGGTGGCTCTCTCAGGAATGTTCCTGTTGGTGGAGGTTCCAGAAAGAACAAGAGACCTTCTTTTTCTTCGTCTTCTACTACTTCTTCAACAACATCAGCAGCAGCAAAGAAGCTTCCAGAACCTTCTCCTCCTCATCATCATCAGAACAAGATCCACCAAGCCCAAGATCTTAACTTGGCATACCCAACACAACCACCATCAATATCATCACTCCCTCCACAACAACAACCTGAGATTTCTGGAAGTTCTAATAATAATTCTTCGAGGGGTTTGATTAATTCCCTGATGCCCATGTCGGTTTCATCAGATGCTGCTAGCATGATGCATCATCATCATCATGGGCTTCCTTTGGAGTTCAAGCCTCAGCATCATCATCAAGGGCTTCATTTTAGCTTTGAGGGGTTTGAGAATAATGGGTTAATTGGAACTGGTATTCATAATCATCATCATCAGGGAATGCAGCAATTGGGTAATTCTGCTGGTGGTGCTGGTGCAAGAACGATCTTGTTCCCTATTGAAGAATTGAAGCACGTGCCAAGCACTACTACTAGCCATGAGTTAATTGATCAGCAAAATAATAGAGCAAGCAGCCATGGAGATCCAAGTGGGTTTTGGAATGGCATGTTAGGTGGAGGAGCATGGTAG 873 0.4376 MDTAQWAQGNIGVVKPMELGSNPKPGMLEKKARPQKDQALNCPRCNSTNTKFCYYNNYSLSQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRPSFSSSSTTSSTTSAAAKKLPEPSPPHHHQNKIHQAQDLNLAYPTQPPSISSLPPQQQPEISGSSNNNSSRGLINSLMPMSVSSDAASMMHHHHHGLPLEFKPQHHHQGLHFSFEGFENNGLIGTGIHNHHHQGMQQLGNSAGGAGARTILFPIEELKHVPSTTTSHELIDQQNNRASSHGDPSGFWNGMLGGGAW 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0974 290 Pfam Dof domain, zinc finger 37 94 IPR003851 GO:0003677|GO:0006355
Lele25g0974 290 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 29 196 IPR045174 GO:0003700|GO:0006355
Lele25g0974 290 MobiDBLite consensus disorder prediction 268 290 - -
Lele25g0974 290 MobiDBLite consensus disorder prediction 149 169 - -
Lele25g0974 290 ProSiteProfiles Zinc finger Dof-type profile. 40 94 IPR003851 GO:0003677|GO:0006355
Lele25g0974 290 MobiDBLite consensus disorder prediction 92 112 - -
Lele25g0974 290 ProSitePatterns Zinc finger Dof-type signature. 42 78 IPR003851 GO:0003677|GO:0006355
Lele25g0974 290 MobiDBLite consensus disorder prediction 78 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0974 Lele-ChrLele25 6289605 6291109 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0974 1 290 C2C2-Dof Transcription Factor Family AT4G24060 37.677 5.40e-47 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lele25g0974 zf-Dof 1.5e-33 No_clan