Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0911 ATGTTGGGTTGTGAATTCCCTGCTGCTGCTCCTCCTGCCAATAATCCTAAGCCCTTCCCTAGGTGGAAGCCCGACCACGTGGAGCCGCCTTCCCCTTGCCCTCGCTGTGCTTCTACCAACACCAAATTCTGTTACTACAACAACTACAGCTTTTCCCAGCCCAGGTACTTGTGTAAATCTTGCCGTCGCTACTGGACCAAAGGTGGCTTCCTCCGCAACGTCCCCGTCCGCGGTGGTTCCCGTAAATCCCGCCGTACTAAGACCCCCCGGCTCCCACCACCAAACCAGCGTCTTTCCACCGACCATGATCCTAATAATAAATCGGACAAAGTCTCCGAGGCTGACAAGTCCCGGGCCAAAGGGTCCGACATTGACATGGCCGCCGTCTTTGCTAATTACTTGAGCTCATCAGGTCATGATTCCAATACCGAGAACGATGCGCCTCAGCCGTCGGATCCGGTGGTAGAGGGTGAGGGGCTTCTTCCTCGAGAGGAGTCGAGGATGAGTGGGATTGAGCTGGAGTGGGAAAGCTTGTTAGGTGGCGGTGATGGAGAAGTGGTCCAGGATATTTTCTGCTTGTCCGGTCCTACCACATCGTCTTCGTCGTCTGTCATATGGCAACCCCCTCTGATGCAGTTGCAGGAGGAGTTGGAGAATCCCTTGCCCTTCAACCATTATGAGGTTGCTCAACTGCCTATAGCCGATTCCTGGAATTGGAATTCCCTCGATTTTCCTACTTTGCCGGAATTCTCATCAAGCTAG 762 0.5381 MLGCEFPAAAPPANNPKPFPRWKPDHVEPPSPCPRCASTNTKFCYYNNYSFSQPRYLCKSCRRYWTKGGFLRNVPVRGGSRKSRRTKTPRLPPPNQRLSTDHDPNNKSDKVSEADKSRAKGSDIDMAAVFANYLSSSGHDSNTENDAPQPSDPVVEGEGLLPREESRMSGIELEWESLLGGGDGEVVQDIFCLSGPTTSSSSSVIWQPPLMQLQEELENPLPFNHYEVAQLPIADSWNWNSLDFPTLPEFSSS 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0911 253 MobiDBLite consensus disorder prediction 135 149 - -
Lele25g0911 253 ProSiteProfiles Zinc finger Dof-type profile. 31 85 IPR003851 GO:0003677|GO:0006355
Lele25g0911 253 MobiDBLite consensus disorder prediction 102 120 - -
Lele25g0911 253 Pfam Dof domain, zinc finger 31 85 IPR003851 GO:0003677|GO:0006355
Lele25g0911 253 ProSitePatterns Zinc finger Dof-type signature. 33 69 IPR003851 GO:0003677|GO:0006355
Lele25g0911 253 MobiDBLite consensus disorder prediction 135 157 - -
Lele25g0911 253 MobiDBLite consensus disorder prediction 11 26 - -
Lele25g0911 253 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 27 147 IPR045174 GO:0003700|GO:0006355
Lele25g0911 253 MobiDBLite consensus disorder prediction 1 26 - -
Lele25g0911 253 MobiDBLite consensus disorder prediction 72 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0911 Lele-ChrLele25 5830080 5830841 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0911 33 148 C2C2-Dof Transcription Factor Family AT1G21340 49.593 5.60e-33 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lele25g0911 zf-Dof 7.5e-30 No_clan