Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1894 ATGGAGCCCGGGCATGTTTTGAGTGAAATGCAGGAAATGCATTCCATCGCGAGAGCTAGATTGTTCAGTGCCGGGGGTGCCGCTGGAGACAGGAGGCTCAGGCCTCACCATCACGCTCACAACAACAACGACAGCATGAACCACCCGCCATTGAAGTGCCCCAGGTGTGACTCCCTCAACACCAAGTTCTGCTACTACAACAACTACAACCTCTCTCAGCCGCGCCATTTCTGCAAGAGTTGCCGTAGATACTGGACCAAGGGCGGCGTCCTCCGTAACGTCCCCGTCGGCGGCGGTTGTCGGAAATCCAAACGCTCCAAGCCCAAGAACTCTTACTCAGAAACTTCATCCGCCGCTGCGACAACAGCACCACCGCCGTCGCCGTCGCAACCGGATCACGAGCGTAAGACGTCCAACTCTCATTCCAGCAGTGAAAACTCTAGTCTTACTGCTGTCGCTACCGCCGTCACCACAGAAACGATTTCAGCTCCTTCAACCAACTCCTCGTTCAATAACTTGTTTGACAATCTTCAGGATTCGAACCTCGTCGTCCATTCCAATTCGAAGCCCAGCCTGGAACCGGGCGTCACCGAACAAGGAGGAGACTCCGGGATTTTCTCGGAGATAGAGAACTTGACGAGCCTGATCACTCCCACTAACGGGACCCTGGCGTTTGGATACGGGAATATAACCGACGCCTCGTCGTTTCAGCTGTCCAGCCAGTGGCAGAAAGGGATGGACACGAGCGATCTTCGTCATCAGGACTTGAAGTGGCCGGAGTCGACGACGGGATCGATGATGGAGCAGACTGTGCCGATGGAAAGTAAAATGAGGAACGGAGGATTGGGGCCGCTGGATTGGCAAGGGAGCACGGATCATGAAGGGCTGTTTGATGCTGGGAACACCGTAGATGACGGTATGTGGAGCCACAATCAGTGGAATGAAGACAATTCGAGTCTTTTTCATCTGCCTTGA 975 0.5436 MEPGHVLSEMQEMHSIARARLFSAGGAAGDRRLRPHHHAHNNNDSMNHPPLKCPRCDSLNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGVLRNVPVGGGCRKSKRSKPKNSYSETSSAAATTAPPPSPSQPDHERKTSNSHSSSENSSLTAVATAVTTETISAPSTNSSFNNLFDNLQDSNLVVHSNSKPSLEPGVTEQGGDSGIFSEIENLTSLITPTNGTLAFGYGNITDASSFQLSSQWQKGMDTSDLRHQDLKWPESTTGSMMEQTVPMESKMRNGGLGPLDWQGSTDHEGLFDAGNTVDDGMWSHNQWNEDNSSLFHLP 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1894 324 MobiDBLite consensus disorder prediction 95 151 - -
Lele24g1894 324 Pfam Dof domain, zinc finger 50 105 IPR003851 GO:0003677|GO:0006355
Lele24g1894 324 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 39 228 IPR045174 GO:0003700|GO:0006355
Lele24g1894 324 ProSiteProfiles Zinc finger Dof-type profile. 51 105 IPR003851 GO:0003677|GO:0006355
Lele24g1894 324 ProSitePatterns Zinc finger Dof-type signature. 53 89 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1894 Lele-ChrLele24 23698641 23699615 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1894 30 324 C2C2-Dof Transcription Factor Family AT5G60850 39.869 4.64e-50 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lele24g1894 zf-Dof 5e-33 No_clan