Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1724 ATGGATTTTTCTCCTCTTCACGAGCACGTCTGCATGGAATCTTCGGATCATTGGCTTCAGGGTGCAGTTCAAGAGGAATCTGGAGTTATGGATTCTTCATCTTCGTCTCCACCATTAATGGAGAGGAGGGTGAGGCCAGCACCAACGGACCAAGCTTTGAAGTGTCCGAGGTGTGAGTCGACAAATACCAAGTTCTGCTACTACAACAACTATAGTCTCTCTCAGCCAAGGTACTTCTGCAAAACTTGCAGAAGATACTGGACCAAAGGAGGCACATTGAGAAACATCCCAGTAGGTGGAGGTTGCAGAAAGAACAAGAAAGTCTCATCCAAGAAATTCAACGAGGTTGTCCACACGCAGTCGTCGGAGCCCAAAGATCTTCAACTCACATCTGCTTCTTCTAATTTCCCAGATCCTGCTATGCATTTTCCCCACCCAGCGGGACTAATGATGGAGAATTCCAGCAGGCTCATGGAAACTAAGTTTGGAGGGATGATAAATAATGTTATGGGAAATATTGGCGATACTGCGATTATTGCAGATCAGATACGTTACAGCCAAAATGGGTCGTTATTGGCACAGAATTTCCAGTGTTTTGGAGGAAATGTGTGTTACTTTGATGGCTATAACGGTAATATTGGTGGGACTTATAGCACAATGGATTCTTTTTACCATGGGAATGAGGATGTTGGTGCAATTACTCATGATGTGAAGCCAAATCCTAAGTTATTGTCTCTTGAATGGCAAGACCAACAAGGTTGTTCTGATGCTGGGAAAGATCCTTTTGGGTATAATATCAACACTAGTCTGGGATCATGGAGTGGCATGATCAATGGTTATGGAGCGTCCACAACAAACCCTTTGATCTAA 870 0.4391 MDFSPLHEHVCMESSDHWLQGAVQEESGVMDSSSSSPPLMERRVRPAPTDQALKCPRCESTNTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVSSKKFNEVVHTQSSEPKDLQLTSASSNFPDPAMHFPHPAGLMMENSSRLMETKFGGMINNVMGNIGDTAIIADQIRYSQNGSLLAQNFQCFGGNVCYFDGYNGNIGGTYSTMDSFYHGNEDVGAITHDVKPNPKLLSLEWQDQQGCSDAGKDPFGYNINTSLGSWSGMINGYGASTTNPLI 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1724 289 ProSitePatterns Zinc finger Dof-type signature. 55 91 IPR003851 GO:0003677|GO:0006355
Lele24g1724 289 ProSiteProfiles Zinc finger Dof-type profile. 53 107 IPR003851 GO:0003677|GO:0006355
Lele24g1724 289 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 40 172 IPR045174 GO:0003700|GO:0006355
Lele24g1724 289 Pfam Dof domain, zinc finger 50 107 IPR003851 GO:0003677|GO:0006355
Lele24g1724 289 MobiDBLite consensus disorder prediction 25 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1724 Lele-ChrLele24 22520169 22521117 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1724 30 133 C2C2-Dof Transcription Factor Family AT5G60200 58.654 8.67e-39 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lele24g1724 zf-Dof 6.3e-34 No_clan