Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0221 ATGGATTTTTCTCCTCTTCACGAGCACGTCTGCATGGAATCTTCAGATCATTGGCTTCAGGGAGCAGTTCAAGAGGAATCTGGAGTAATGGATTCTTCGTCTTCGTCTCCGCCATTAATGGAGAGGAGGGTGAGGCCAGCACCAACGGACCAAGCTTTGAAGTGTCCGAGGTGTGAGTCGACAAATACCAAGTTCTGCTACTACAACAACTATAGTCTGTCTCAGCCAAGGTACTTCTGCAAAACTTGCAGAAGGTACTGGACCAAAGGAGGCACATTGAGAAACATCCCAGTAGGTGGAGGTTGCAGAAAGAACAAGAAAGTCTCGTCCAAGAAATTCAACGACGTCGTTCACAACACGCAGTCGTCGTCGTCGGAACCCAAAGATCTTCTACTCACATCAGCTTCTTCCAACTTCCCAGATCATGCTATGCATTTTCCCCACCCAGTGGGACTAATGCTGGAGAATTCCAGCAGGCTCATGGAAGCTAAGTTCGGAGGGATAAATAATGTTATGATGGGAAATATTGGCGATACAGCGATCGCAGGTCAGATAAATTATAGCCACAATGGGTCGTCGTTATTGGCACAGAATTTCCAGGGTTTTGGAGGAAATATGTGTTACTTTGATGACTATAACGGTAATATTGGTGGGACTTATAGCACAATGGATTCTTTTTACCATGGTATTAATGAGGATCATCAAATTATTCATGATATGAAGCCAAATCCTAAGTTATTGTCTCTTGAATGGCAAGAGCAAGGTTGTTCTGATGCTGGCAAAGAGCCTTTTGGGTATATCAACACTGGTTTGGGATCATGGACGGGCATGATCAACGGTTATGGACCCTCCACAACGAACCCTTTGATCTAA 873 0.4467 MDFSPLHEHVCMESSDHWLQGAVQEESGVMDSSSSSPPLMERRVRPAPTDQALKCPRCESTNTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVSSKKFNDVVHNTQSSSSEPKDLLLTSASSNFPDHAMHFPHPVGLMLENSSRLMEAKFGGINNVMMGNIGDTAIAGQINYSHNGSSLLAQNFQGFGGNMCYFDDYNGNIGGTYSTMDSFYHGINEDHQIIHDMKPNPKLLSLEWQEQGCSDAGKEPFGYINTGLGSWTGMINGYGPSTTNPLI 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0221 290 ProSitePatterns Zinc finger Dof-type signature. 55 91 IPR003851 GO:0003677|GO:0006355
Lele23g0221 290 MobiDBLite consensus disorder prediction 26 47 - -
Lele23g0221 290 ProSiteProfiles Zinc finger Dof-type profile. 53 107 IPR003851 GO:0003677|GO:0006355
Lele23g0221 290 Pfam Dof domain, zinc finger 50 107 IPR003851 GO:0003677|GO:0006355
Lele23g0221 290 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 40 154 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0221 Lele-ChrLele23 1507714 1508671 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g0221 30 110 C2C2-Dof Transcription Factor Family AT5G60200 70.370 2.96e-38 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lele23g0221 zf-Dof 6.3e-34 No_clan