Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1946 ATGGAGCCCGGGCATGTTTTGAGTGAAATGCAGGAAATGCATTACATCGCAGGAGCTAGATTGTCCAGTGCCGGGGGTGCCGCTGGAGACAGGAGGCTCAGGCCTCACCATCACGGTCACAACAACAACGACAGCATGAACCACCCGCCGTTGAAGTGCCCCAGGTGTGACTCCCTCAACACCAAGTTCTGCTACTACAACAACTACAACCTCTCTCAGCCGCGCCATTTCTGCAAGAGTTGCCGTAGATACTGGACCAAGGGCGGCGTCCTCCGTAACGTCCCCGTCGGCGGCGGTTGTCGGAAATCCAAGCGCTCCAAGCCTAAGAACTCTTCCTCAGAAACTTCCTCCGCCGCTGCAACAACAGCACCGCCGCCGCCGCTGCCGCCATCGCAACCGGAGCGCGAGCGTAAGACGTCCAACTCTCATTCCAGCAGTGAAAACTCCAGTCTTACCGCTGTCGCTGCCGCCGTCACCACAGAAGCGGTTTCAGCCCCTTCAACCAACTCCTCGTTCAATAACTTGTTCGACAATCTTCAGGATTCGAACCTTGTCGTCCATACCAATTCGAAGCCCAGCCTGGAACCGGGCGTCACCGAACAAGGAGGAGACTCCGGGATTTTCTCGGAGATAGAGAACTTGACGAGCCTGATCACACCCACTAACGGGACCCTGGCGTTTGGATACGGGAATATCACCGACGCATCGTCGTTTCCGCTGTCCAGCCAGTGGCAGAAAGGGATGGACACGAGCGATCGTCGTCATCAGGACTTGAAGTGGCCGGAGTCGACGATGGGATCGATGATGGAGCAGACGGTGCGGATGGAAAGTAAAATGAGGAACGGAGGATTGGGGCAGCTGGATTGGCAAGGGAGCACGGATCATGAAGGACTGTTTGATGCTGGGAACACCGTAGATGACGGTCTGTGGAGCCACAATCAGTGGAATGAAGACAATTCGAGTCTTTTTCATCTGCCTTGA 981 0.5576 MEPGHVLSEMQEMHYIAGARLSSAGGAAGDRRLRPHHHGHNNNDSMNHPPLKCPRCDSLNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGVLRNVPVGGGCRKSKRSKPKNSSSETSSAAATTAPPPPLPPSQPERERKTSNSHSSSENSSLTAVAAAVTTEAVSAPSTNSSFNNLFDNLQDSNLVVHTNSKPSLEPGVTEQGGDSGIFSEIENLTSLITPTNGTLAFGYGNITDASSFPLSSQWQKGMDTSDRRHQDLKWPESTMGSMMEQTVRMESKMRNGGLGQLDWQGSTDHEGLFDAGNTVDDGLWSHNQWNEDNSSLFHLP 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1946 326 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 38 230 IPR045174 GO:0003700|GO:0006355
Lele22g1946 326 MobiDBLite consensus disorder prediction 25 49 - -
Lele22g1946 326 Pfam Dof domain, zinc finger 50 105 IPR003851 GO:0003677|GO:0006355
Lele22g1946 326 MobiDBLite consensus disorder prediction 95 153 - -
Lele22g1946 326 ProSiteProfiles Zinc finger Dof-type profile. 51 105 IPR003851 GO:0003677|GO:0006355
Lele22g1946 326 ProSitePatterns Zinc finger Dof-type signature. 53 89 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1946 Lele-ChrLele22 24137735 24138715 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g1946 30 323 C2C2-Dof Transcription Factor Family AT5G60850 38.284 3.62e-46 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lele22g1946 zf-Dof 5.5e-33 No_clan