Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0942 ATGGGTCTTTCTTCTCTGCACGTCTGCATGGAATCATCAGATCACTGGCTCCAGGGCACAATTCACGAGGAATCTGGATTGGATTCATCTTCACCTTCAGCAGGAGACATGCTCACATGCTCCAGGCCATTGATAGAGAGGAGGCTAAGACCTCCACATGATCAAGCCCTTAAGTGCCCTAGGTGTGATTCCACACACACCAAGTTCTGCTACTACAACAATTACAGCCTCTCTCAGCCAAGGTACTTCTGCAAAACTTGCAGAAGGTACTGGACCAAAGGTGGTACTCTCAGGAACATCCCTGTTGGTGGTGGTTGCAGAAAGAACAAGAAAGTCTCCAACAAAAAATCCAATACTAATAGTGATCCATCACATAATAATCATCAAAACCAACCATTATCATCACAGCCTGCTGTAGGAATAGCCACCTCTTATTACCACAACCCTAAAGACCATCATCTTCAACTTTCTTTCCCAGATGCTCATCAGTTTTCTCACATCGGTAACTTACTGGGAAACCCTAATTTTATGCTTGAGAACCCTAGACCCATTGACTTCATGGAGAGTAAGTTAGAAGGGATAATTGGGAGTACTACTTCTAGGAACTTCCATTTTCCGGGAAATAGTGACATGGGTATGGGAATTGCGGTTGGAGACATTAATGGTCATCATCACAATGGTGGGTTGCCGCCAAATTTTCAGAGTCTTTGCTCTCCATCTGGATTTGTTGGGGGTATGTCATATTTTGATGGTAATAACAATAATATCATGGACTCTTCATGTCAGAGACTGATGCTGCCATATGATCAGCATGCCAATGGGGACCCAAATGCCACCATTGATGTGAAGCCAAACCCTAAGCTCTTGTCTCTTGAATGGCAGGACCAGGGTTGCTCAGATGCTGGAAAAGAGACGTCGTTTGTGTATTTTTAA 933 0.4405 MGLSSLHVCMESSDHWLQGTIHEESGLDSSSPSAGDMLTCSRPLIERRLRPPHDQALKCPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVSNKKSNTNSDPSHNNHQNQPLSSQPAVGIATSYYHNPKDHHLQLSFPDAHQFSHIGNLLGNPNFMLENPRPIDFMESKLEGIIGSTTSRNFHFPGNSDMGMGIAVGDINGHHHNGGLPPNFQSLCSPSGFVGGMSYFDGNNNNIMDSSCQRLMLPYDQHANGDPNATIDVKPNPKLLSLEWQDQGCSDAGKETSFVYF 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0942 310 ProSiteProfiles Zinc finger Dof-type profile. 57 111 IPR003851 GO:0003677|GO:0006355
Lele20g0942 310 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 46 199 IPR045174 GO:0003700|GO:0006355
Lele20g0942 310 Pfam Dof domain, zinc finger 54 111 IPR003851 GO:0003677|GO:0006355
Lele20g0942 310 ProSitePatterns Zinc finger Dof-type signature. 59 95 IPR003851 GO:0003677|GO:0006355
Lele20g0942 310 MobiDBLite consensus disorder prediction 116 136 - -
Lele20g0942 310 MobiDBLite consensus disorder prediction 102 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0942 Lele-ChrLele20 15591055 15592344 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0942 1 192 C2C2-Dof Transcription Factor Family AT5G62940 47.414 2.71e-48 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lele20g0942 zf-Dof 1.6e-33 No_clan