Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0763 ATGCAGGAAATACATTCTATTGGGGGTGGTAGATTTTTCGACAGCGGTGGTGGTGGAGCTGGTGGCGGAGACAGGAGAGTCAGGCCGCACCACCACCAGAATCAGCAGGCCTTGAAGTGCCCGAGGTGTGACTCCCTCAACACCAAGTTCTGCTACTACAACAATTACAACCTCTCCCAACCCCGCCATTTCTGCAAGAGCTGCCGACGGTACTGGACCAAAGGTGGCGTCCTCCGCAACGTCCCCTTCGGCGCAGGATGCCGTAAATCCAAGCGCTCCAAGCCCAAAACCTCCTCCTCTTCAGAACCTCCTCCCACTCCGACACGACCCCCGCCGCCTCCGCCGCCGCAAGAGAACCATAAGTCGAGCTCTCGTTCCAGCAGCGAAAGCTCCAGTCTCGCCACTGCCGCCGCCGCCGCCGCCACTGAAGCGTTATCGGCGCCTTCGTCGTCGAACTGTGAGCTGCTCCCCAATCATACTTCGAAACCTAATCTAGAGTCGGTATTGATCGAGCAGGGAGGGGACTGCGGTATTTTCTCGGAGATAGGGAGCTTTACAAGCCTGATCAATACTACAAGCGAAGCATTGTCGTTTGGATTCGGGAATATTCCGGAGCCAACGTCGTTTCGGTTCGGCAGTACTACTCAACAAGGGATGGCAGAGAACGAGTCATCAGGAGAGGGGCAGCAGGCACAGCAGAAAGAGACGGGGATGGGTGACATGATTACTCAACAGGAGTTGGAGTTGCCGGAGATCATGCCTGGGACGTTACTGGATCCGACGGGGCCGGTGGATTGGTCGGCGTTGCGTAGTAAGAACGAGAACGGCGGTTTCAGATTGTTGGATTGGCAAGGAGGCACAGAGCAAGGTTTGTTTGATCTGCCTAACACAGTGGATCAATCTTACTGGAGTCACACTCACTGGACTGATCAAGAAAATCCCAGTCTCTTTCATCTTCCTTGA 963 0.5514 MQEIHSIGGGRFFDSGGGGAGGGDRRVRPHHHQNQQALKCPRCDSLNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGVLRNVPFGAGCRKSKRSKPKTSSSSEPPPTPTRPPPPPPPQENHKSSSRSSSESSSLATAAAAAATEALSAPSSSNCELLPNHTSKPNLESVLIEQGGDCGIFSEIGSFTSLINTTSEALSFGFGNIPEPTSFRFGSTTQQGMAENESSGEGQQAQQKETGMGDMITQQELELPEIMPGTLLDPTGPVDWSALRSKNENGGFRLLDWQGGTEQGLFDLPNTVDQSYWSHTHWTDQENPSLFHLP 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0763 320 MobiDBLite consensus disorder prediction 120 137 - -
Lele20g0763 320 MobiDBLite consensus disorder prediction 83 153 - -
Lele20g0763 320 MobiDBLite consensus disorder prediction 1 37 - -
Lele20g0763 320 MobiDBLite consensus disorder prediction 100 119 - -
Lele20g0763 320 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 30 229 IPR045174 GO:0003700|GO:0006355
Lele20g0763 320 ProSitePatterns Zinc finger Dof-type signature. 40 76 IPR003851 GO:0003677|GO:0006355
Lele20g0763 320 Pfam Dof domain, zinc finger 36 92 IPR003851 GO:0003677|GO:0006355
Lele20g0763 320 ProSiteProfiles Zinc finger Dof-type profile. 38 92 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0763 Lele-ChrLele20 14566187 14567149 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0763 24 317 C2C2-Dof Transcription Factor Family AT5G60850 41.100 8.82e-55 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lele20g0763 zf-Dof 3e-32 No_clan