Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele20g0370 | ATGAATAAAGGAAGCTTAGGCCCAAATCTCAAGCTCACTGTTCCTGTTTCTGATCAAGTTTCTTTCGCCAAGTTCCTGACTGAAAGCGGGACCTTCAAGGAGGGGGATCTTCTGGTGAACAAATATGGCGTTCAAATTATCTCTCAGAATGAAGTTGAAGCTCCACCCCTTATTAGGCCACTAGACAACCAGTTAAGTTTAGCAGACATAGACGCAATCAAAGTGGTCGGGAAGGGAAACGGCGGAATAGTGCAATTGGTGCAACACAAATGGACTAATCAGTTTTTTGCATTGAAGGTAATTCAAATGAATATTGACGAGTCTATGCGCAAGCAGATTGCACAGGAGCTGAAAATTAATCAGTCAGCTCAATGTCCCTATGTTGTTGTCTGTTACCAGTCCTTTTATGAAAATGGCATTATATCAATCGTCTTAGAGTACATGGACGGAGGGTCTCTGGAAGATTTTTTGAAGAAAGTGAAATCAATTCCAGAGGCATATCTTGCTGCCATTTGCAAGCAGGTGCTGAAGGGTTTAACATATCTTCACCATGAAAAACATATTATTCATAGGGACTTAAAGCCTTCCAATTTGTTGATAAATCACAGAGGGGAAGTAAAGATCACTGATTTTGGCGTCAGTGCAATCATGGAAAGTACATCTGGTCAAGCTAACACTTTCATTGGAACACGTATCTATATGTCTCCTGAGAGAATCAATGGATTCCAGCGTGGCTACAACTACAAATGTGACATATGGAGTTTGGGACTAATATTGCTCGAGTGTGCTATGGGTAGGTTTCCATATACACCGCCCGATCAAGGAGAAAGATGGGAAAATGTTTTTCAGCTTATTGAAGCTGTTGTTGAAGCTCCTCCTCCCTCTGCTCCACCTGATCAATTTTCTCCAGAGTTGTGTTCATTTATATCAGCATGTTTGCAGAAAAATCCAAAGGATAGAATGTCAGCTCAAGAACTTATGAGACATCCATTTGTCAATATGTATGGGGACTTGGATGTGGATCTTTCAGCTTACTTCTCCAACGCAGGATCCCCCTTGCTACTTTATAAAACTTACTAG | 1080 | 0.4111 | MNKGSLGPNLKLTVPVSDQVSFAKFLTESGTFKEGDLLVNKYGVQIISQNEVEAPPLIRPLDNQLSLADIDAIKVVGKGNGGIVQLVQHKWTNQFFALKVIQMNIDESMRKQIAQELKINQSAQCPYVVVCYQSFYENGIISIVLEYMDGGSLEDFLKKVKSIPEAYLAAICKQVLKGLTYLHHEKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMESTSGQANTFIGTRIYMSPERINGFQRGYNYKCDIWSLGLILLECAMGRFPYTPPDQGERWENVFQLIEAVVEAPPPSAPPDQFSPELCSFISACLQKNPKDRMSAQELMRHPFVNMYGDLDVDLSAYFSNAGSPLLLYKTY | 359 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele20g0370 | 359 | ProSiteProfiles | Protein kinase domain profile. | 70 | 332 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Lele20g0370 | 359 | PANTHER | MITOGEN-ACTIVATED KINASE KINASE KINASE | 17 | 335 | - | - | |
| Lele20g0370 | 359 | SMART | serkin_6 | 70 | 332 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Lele20g0370 | 359 | FunFam | Mitogen-activated protein kinase kinase 6 | 151 | 351 | - | - | |
| Lele20g0370 | 359 | SUPERFAMILY | Protein kinase-like (PK-like) | 68 | 337 | IPR011009 | - | |
| Lele20g0370 | 359 | Gene3D | Transferase(Phosphotransferase) domain 1 | 150 | 351 | - | - | |
| Lele20g0370 | 359 | FunFam | Mitogen-activated protein kinase kinase 6 | 40 | 149 | - | - | |
| Lele20g0370 | 359 | ProSitePatterns | Protein kinases ATP-binding region signature. | 76 | 99 | IPR017441 | GO:0005524 | |
| Lele20g0370 | 359 | Gene3D | Phosphorylase Kinase; domain 1 | 48 | 149 | - | - | |
| Lele20g0370 | 359 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 188 | 200 | IPR008271 | GO:0004672|GO:0006468 | |
| Lele20g0370 | 359 | Pfam | Protein kinase domain | 73 | 332 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Lele20g0370 | 359 | CDD | PKc_MAPKK_plant_like | 68 | 335 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lele20g0370 | Lele-ChrLele20 | 11476592 | 11480154 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lele20g0370 | 1 | 327 | MAP Kinase Kinase Gene Family | AT4G29810 | 66.071 | 4.42e-165 | 462 |
Transcription factors information