Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g0691 ATGCAGGAAATACATTCTATCGGGGGTGGTAGATTTTTCGACGGTGGTGGCGGTGGAGCTGGCGGCGGAGAGAAGAGGCCGCACCACCACCAGAACCAGCAGGCCTTGAAGTGCCCCAGGTGTGACTCTCTCAACACCAAGTTCTGCTACTACAACAATTACAACCTCTCCCAACCCCGCCATTTCTGCAAGAGCTGCCGTCGGTACTGGACCAAAGGTGGCGTCCTCCGCAACGTGCCCGTCGGCGGAGGATGCCGTAAATCCAAACGCTCGGAGCCTAAAGCCTCTCCCTCTTCAGAACCTCCTCCCAAGCCGACACGAGCCCCGGCACCGCCGCCGCCGCAAGAGAACCATAAGTCGAGCTCTCATTCCAGCAGCGAAAGCTCCAGCCTCGCCGCCGCAGCCACTGAAGCGTTATCGGCGCCTTCGTCTTCGAACCGTGAGCTGCTCACCAATCAGACTTCGAAACCTAATTTGGAGTCTGGATTGATGGAGAAGGGAGGGGACTGCGGTATTTTCTCGGAGATAGGGAGCTTCACGAGCCTGATCACTACCACAAGCGAAGCATTGTCGTTCGAATTCGGGAATATTCCGGAGCCGACGTCATTTCGGTTCGGTGGCACTCCCCAACTAGAAGGGATGGCCGGGAACGAGTTATTATCGGGGGAGTGGCAGCAGGCACAGCAGAAAGAGACGGGCATGGGTGACATGATTTCTCAGCAGGAGTTGAAGTTGCCGGAGATCATACCGGGGACGTTACTCGATCCGACGGTGCCGTTGGATTTGTCGGCGTTGCAGAGTAAGAACGAGAACGGTGGTTTCGGATCGTTGGATTGGCAAGGGGTCACGGACCAAGGTTTGTTCGATCTGCCTAACACCGTCGATCATTCTTACTGGAGTCACACTCACTGGACCGATCAAGAAAATCCCAGTCTTTTTCATCTTCCATGA 951 0.5573 MQEIHSIGGGRFFDGGGGGAGGGEKRPHHHQNQQALKCPRCDSLNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGVLRNVPVGGGCRKSKRSEPKASPSSEPPPKPTRAPAPPPPQENHKSSSHSSSESSSLAAAATEALSAPSSSNRELLTNQTSKPNLESGLMEKGGDCGIFSEIGSFTSLITTTSEALSFEFGNIPEPTSFRFGGTPQLEGMAGNELLSGEWQQAQQKETGMGDMISQQELKLPEIIPGTLLDPTVPLDLSALQSKNENGGFGSLDWQGVTDQGLFDLPNTVDHSYWSHTHWTDQENPSLFHLP 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g0691 316 ProSitePatterns Zinc finger Dof-type signature. 38 74 IPR003851 GO:0003677|GO:0006355
Lele19g0691 316 MobiDBLite consensus disorder prediction 80 163 - -
Lele19g0691 316 ProSiteProfiles Zinc finger Dof-type profile. 36 90 IPR003851 GO:0003677|GO:0006355
Lele19g0691 316 MobiDBLite consensus disorder prediction 117 160 - -
Lele19g0691 316 Pfam Dof domain, zinc finger 34 90 IPR003851 GO:0003677|GO:0006355
Lele19g0691 316 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 27 206 IPR045174 GO:0003700|GO:0006355
Lele19g0691 316 MobiDBLite consensus disorder prediction 96 116 - -
Lele19g0691 316 MobiDBLite consensus disorder prediction 1 31 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g0691 Lele-ChrLele19 4011561 4012511 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g0691 24 313 C2C2-Dof Transcription Factor Family AT5G60850 43.408 3.25e-54 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lele19g0691 zf-Dof 2.4e-33 No_clan