Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g0623 ATGAAGAGGGTCAATAGGAATCCGTATGATGATGCTGAAAAGCTCACAGATTTGGACAGCCGCAATAACTTTTCGAGGGATTCTGACAAGAAATGTGGTTTTAATTTGATGCAATTGACGGGGTTCTTCCTCCTTTGTTTGATGCTCTTATCTGTACTGTTTTCGGTGTCGGTGGTTCTCCGAGACCCCCCTTCAGATGGCGTTGTCGAAGCATCTACATCTGTTGTATTTCAAGCTAAACAGAGTGAAGGTTTGAACAAAGATTTCTCTGATTCTATTGAGTTGCCAAGAGATGAACTCCTGGGTGGCCTTCTTGCTGCCGGGTTTGATGGAAGATCTTGTATCAGCAGGTATAAATCAAGCATATATGGCAAAGGACTATCAGGAAAACCTTCTATTTATCTGGTTTCTAGGTTAAGAAAATATGAAGCTCTCCACAAAGAATGTGGACCTTATACTGAATCCTATAACAAAACAGTGAAAGATCTCAGCTCTGGTCATTTTTCCGGGTCGTCGGTCTGTAAATATGTAGTTTGGATTTCATTTAGTGGGTTAGGGAATAGAATATTGACATTAGCTTCTGCATTTCTTTACGCTCTACTCACAAACCGTGTCCTGCTAGTCGATCCTGGAGGTGATATGAGAGATCTCTTTTGTGAACCATTTCCTGATGTTTCCTGGTTTCTGCCTCCCAATTTCCCCCTGGCGACCGAAATGCACAATCTTAATCAGCAATCTGCTCAATGTTATGGGAAGATGCTGAAAGACAATTCAATTACAAATTCCACAGTGCCATCTCATGTCTACCTTCATCTAGCCCATGATTATGATGATCAAGATAAGCTATTCTTCTGCGACGAAGACCAAAGTTATCTCCAGAAAGTACCCTGGTTAATCATGAAAACAGACAATTACTTCATCCCATCTCTATACTTAATGCCTTCTTTTGAGCAGGAACTGTATGATCTCTTTCCAAAGAAGGATACAGTCTTCCATTTCTTGGGTAGATACCTATTCCACCCCACCAACATGGTATGGGGACTTATTACCAGGTACTATGAAGCTTATTTAGCTAAAGCTGATGAAAGATTAGGAATCCAGATTAGAGTGTTTGACACAGAGCCAGGCCCATTTCAACATGTATTGGATCAAATCTTATCCTGTACTTTGAAAGAGAATCTTTTGCCCGATGTAAAGAGACGTCATCAAGATACTGTAAGTTCATCATCGGAAAAGCGAAAGTCAAAAGCAGTACTGATGACATCTTTAAGCTCAGGATATTTTGAAAAGGTAAGGGACATGTATTGGGAGCATCCTACAGTTACAGGGGAGGTGGTTGGAATATACCAACCAAGCCATGAAGGGTATCAGCAAACAGAGAAGCAAATGCACAACCAGAAAGCTTGGGCTGAAATGTATCTGCTGAGCTTAACAGATGTGCTGGTTACTAGCTCATGGTCAACTTTTGGGTACGTGGCTCAAGGCCTTGGAGGCTTGAAGCCGTGGATACTGTACAAGCCGGAGAATCGAACAGCCCCGGATCCTGCATGCCGACGTGCCATGTCAATGGAGCCGTGCTTCCATGCTCCTCCCTTCTATGACTGCAAGGCCAAGAGAGGAACTGACACAGGTGATCTTGTTCCACATGTAAGGCACTGTGAGGATATGAGTTGGGGTCTGAAAGTTGTTGACAGTTAA 1698 0.427 MKRVNRNPYDDAEKLTDLDSRNNFSRDSDKKCGFNLMQLTGFFLLCLMLLSVLFSVSVVLRDPPSDGVVEASTSVVFQAKQSEGLNKDFSDSIELPRDELLGGLLAAGFDGRSCISRYKSSIYGKGLSGKPSIYLVSRLRKYEALHKECGPYTESYNKTVKDLSSGHFSGSSVCKYVVWISFSGLGNRILTLASAFLYALLTNRVLLVDPGGDMRDLFCEPFPDVSWFLPPNFPLATEMHNLNQQSAQCYGKMLKDNSITNSTVPSHVYLHLAHDYDDQDKLFFCDEDQSYLQKVPWLIMKTDNYFIPSLYLMPSFEQELYDLFPKKDTVFHFLGRYLFHPTNMVWGLITRYYEAYLAKADERLGIQIRVFDTEPGPFQHVLDQILSCTLKENLLPDVKRRHQDTVSSSSEKRKSKAVLMTSLSSGYFEKVRDMYWEHPTVTGEVVGIYQPSHEGYQQTEKQMHNQKAWAEMYLLSLTDVLVTSSWSTFGYVAQGLGGLKPWILYKPENRTAPDPACRRAMSMEPCFHAPPFYDCKAKRGTDTGDLVPHVRHCEDMSWGLKVVDS 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g0623 565 FunFam Galactoside 2-alpha-L-fucosyltransferase 347 503 - -
Lele19g0623 565 FunFam Galactoside 2-alpha-L-fucosyltransferase 172 223 - -
Lele19g0623 565 Pfam Xyloglucan fucosyltransferase 75 536 IPR004938 GO:0008107|GO:0016020|GO:0042546
Lele19g0623 565 Gene3D - 171 291 - -
Lele19g0623 565 PANTHER FUCOSYLTRANSFERASE 2-RELATED 43 564 IPR004938 GO:0008107|GO:0016020|GO:0042546
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g0623 Lele-ChrLele19 3609760 3612483 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g0623 37 563 Xyloglucan Fucosyltransferase1 AT2G03220 63.109 0.0 701
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele17g0935 17 20398517 20401110 Lele19g0623 19 3609760 3612483 hybridization
Lele18g0592 18 3551199 3555233 Lele19g0623 19 3609760 3612483 hybridization