Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0653 ATGCCGGAAATACATTCTATCGGGAGCGGTAGATTTTTCGACAGCGGTGGCGGTGGAGCTGGCGGCGGAGACAGGAGAGTCAGGCCGCACCACCACCAGAACCAGCAGGCCTTGAAGTGCCCGAGGTGTGACTCCCTCAACACCAAGTTCTGCTACTACAACAATTACAACCTCTCCCAACCCCGCCATTTCTGCAAGAGCTGCCGACGGTACTGGACCAAAGGTGGCGTCCTCCGAAACGTCCCCATCGGCGCAGGATGCCGTAAATCCAAGCGCTCCAAGCCCAAAACCTCCTCCTCTTCAGAACCTCCTCCCACGCCGACACGACCCCCGCCGCCTCTGCCGCCGCAAGAGAACCATAAGTCGAGCTCTCATTCCAGCAGCGAAAGCTCCAGCCTCGCCGCCGCCGCCACTGAAGCGTTATCGGCGCCTTCGTCGTCGAACCGTGAGCTGCTGACCAATCATACTTCGAAACCTAATTTAGATTCGGGATTGATCGAGCAGGGAGGGGACTGCGGTATTTTCTCGGAGATAGGGAGCTTTTCAAGCCTGATCACTACTACAAGCGAAGCATTGTCGTTTGGATTCGGGAATATTCCGGAGCCAATGTCATTTCGGTTCGGCAGTACTACTCAACAAGGGATGGCCGGGAACGAGTTATCAGAAGAGTGGCAGCTGGCACAGCAGAAAGAGACGGGGATGGGTGACATGATTTCTCAGCAGGAGTTGAAGTTGCCGGAGATCATGCCTGGGACGTTACTGGATCCGACGGTGCCGGTGGATTTGTCGGCGTTGCAGGGTAAGAACGAGAACGGTGGTTTCGGATTGTTGGATTGGCAAGGAGGCACAGAGCAAGGTTTGTTTGATCTGCCTAACACCGTGGATCAATCTTACTGGAGTCACTCTCCCTGGACCGATCAAGAAAATCCCAGTCTCTTTCATCTTCCTTGA 951 0.551 MPEIHSIGSGRFFDSGGGGAGGGDRRVRPHHHQNQQALKCPRCDSLNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGVLRNVPIGAGCRKSKRSKPKTSSSSEPPPTPTRPPPPLPPQENHKSSSHSSSESSSLAAAATEALSAPSSSNRELLTNHTSKPNLDSGLIEQGGDCGIFSEIGSFSSLITTTSEALSFGFGNIPEPMSFRFGSTTQQGMAGNELSEEWQLAQQKETGMGDMISQQELKLPEIMPGTLLDPTVPVDLSALQGKNENGGFGLLDWQGGTEQGLFDLPNTVDQSYWSHSPWTDQENPSLFHLP 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0653 316 ProSiteProfiles Zinc finger Dof-type profile. 38 92 IPR003851 GO:0003677|GO:0006355
Lele18g0653 316 MobiDBLite consensus disorder prediction 83 164 - -
Lele18g0653 316 MobiDBLite consensus disorder prediction 100 118 - -
Lele18g0653 316 MobiDBLite consensus disorder prediction 1 37 - -
Lele18g0653 316 ProSitePatterns Zinc finger Dof-type signature. 40 76 IPR003851 GO:0003677|GO:0006355
Lele18g0653 316 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 30 208 IPR045174 GO:0003700|GO:0006355
Lele18g0653 316 MobiDBLite consensus disorder prediction 119 163 - -
Lele18g0653 316 Pfam Dof domain, zinc finger 36 92 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0653 Lele-ChrLele18 3925873 3926823 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g0653 24 313 C2C2-Dof Transcription Factor Family AT5G60850 41.987 4.44e-53 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lele18g0653 zf-Dof 7.2e-33 No_clan