Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0586 ATGCAGGAAACTAGAGACCCTGCAATTAAACTCTTCGGCCAGAAGATTCCTCTGCCCGGTGACGGCGAGCTTCCCGCCGTTTCCGTGGTCGATGTCGAAGAATCTGAATCCCTAGGGTCCATGGAGGTGGACTCGCTCGAAGGAGGAGACGCTGATGATGGAGAACAACAGGATTCAGAAGAGGAGAGGGATGAAGATGACAAGGATCATTCAGCTGGAAACACTGCAGACAAAAAGAAGGAGGCTGGTGATAATCCAAACTCACAAGAGACTAAGAATCCAGATTCATTGGGTGAGGCTAGTGTGAACCCGAAAACACCTTCCATAGATGAAGAGACTGCAAAATCAAAAAGTGACAACTCCGAGAAGGAGAAAAATGATGCAGCCAACCCGCAGGAGAAAACCCTGAAGAAGCCAGATAAAATACTTCCATGTCCTCGCTGCAACAGCATGGACACCAAATTCTGTTATTACAACAACTACAACATCAATCAGCCTCGTTATTTCTGCAAAGCCTGCCAAAGATACTGGACTGCAGGTGGTACCATGAGGAATGTACCGGTAGGGGCTGGTCGGAGAAAGAATAAGAACTCTTCTTCCCATTATCGCCACATCAGCATTTCAGAGGCTGTACAAGCAGCTAGAATTGATGCACCAAATGGGACTCATCTTCCTGCGTTAAAGGGAAATGGCAGAGTCCTCAGTTTTGGACTAGATGCACCTATTTGTGATTCTATGGCATCTGTCCTGAATCTTGCAGAGAAAAAGGTCCTGAATGGTGTGAGAAACGGCTTTCATAGCAAAGGTGCTGAAACTGGTAGTGATGACTGCTCAAGTGTATCTTCCATTACAGTTTCAAATTCCATGGAGGAAAGTGGCAAGAATGTTCCCCAAGAATCATTGCTCAGAACTAATGGTTTTTCTCCTCCTATCCCATGCCTTCCTGGGGTTCCATGGCCTTATCCTTGGAATGCCCCAGTTCCTTCACCTCCTTTATGCCCTCCAGGATTTCCCTTGTCATTCTATCCTGCGGCCTTTTGGAACTGTGGTGTGCCAAGAAATTGGAATATGCCCTGGTTTCCCCCACACCCCTCTGCTCAACAAAACCCAATATCTCCCACCACTACCAGTAGTCCTAATTCTCCAACATTAGGGAAGCATTCGAGGGAAGGTGATGTGATCAGAACAGACAACTCACAGAAACAAGAACCATCGAAACCGAGAAATGGGTGTGTTTTGATTCCTAAAACCTTGAGAATTGATGATCCAAGTGAAGCTGCAAAGAGTTCGATATGGGCAACTCTAGGAATCAAGAATGAATCTGCAAGTGGAGGAGGCATGTTTCATGCCTTCCAATCAAAGAAGGATAAGAAGGATCGTGCTGTTGAAACCTCAACGGTGTTGCGGGCTAACCCTGCAGCCTTATCTAGATCCCTTAACTTTCATGAGAACTCCTGA 1458 0.4636 MQETRDPAIKLFGQKIPLPGDGELPAVSVVDVEESESLGSMEVDSLEGGDADDGEQQDSEEERDEDDKDHSAGNTADKKKEAGDNPNSQETKNPDSLGEASVNPKTPSIDEETAKSKSDNSEKEKNDAANPQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNINQPRYFCKACQRYWTAGGTMRNVPVGAGRRKNKNSSSHYRHISISEAVQAARIDAPNGTHLPALKGNGRVLSFGLDAPICDSMASVLNLAEKKVLNGVRNGFHSKGAETGSDDCSSVSSITVSNSMEESGKNVPQESLLRTNGFSPPIPCLPGVPWPYPWNAPVPSPPLCPPGFPLSFYPAAFWNCGVPRNWNMPWFPPHPSAQQNPISPTTTSSPNSPTLGKHSREGDVIRTDNSQKQEPSKPRNGCVLIPKTLRIDDPSEAAKSSIWATLGIKNESASGGGMFHAFQSKKDKKDRAVETSTVLRANPAALSRSLNFHENS 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0586 485 MobiDBLite consensus disorder prediction 1 141 - -
Lele18g0586 485 MobiDBLite consensus disorder prediction 66 86 - -
Lele18g0586 485 MobiDBLite consensus disorder prediction 369 385 - -
Lele18g0586 485 PANTHER CYCLIC DOF FACTOR 2 1 485 IPR045174 GO:0003700|GO:0006355
Lele18g0586 485 ProSiteProfiles Zinc finger Dof-type profile. 143 197 IPR003851 GO:0003677|GO:0006355
Lele18g0586 485 MobiDBLite consensus disorder prediction 87 109 - -
Lele18g0586 485 ProSitePatterns Zinc finger Dof-type signature. 145 181 IPR003851 GO:0003677|GO:0006355
Lele18g0586 485 MobiDBLite consensus disorder prediction 46 65 - -
Lele18g0586 485 MobiDBLite consensus disorder prediction 388 402 - -
Lele18g0586 485 MobiDBLite consensus disorder prediction 362 411 - -
Lele18g0586 485 MobiDBLite consensus disorder prediction 443 463 - -
Lele18g0586 485 MobiDBLite consensus disorder prediction 110 141 - -
Lele18g0586 485 Pfam Dof domain, zinc finger 140 197 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0586 Lele-ChrLele18 3509930 3512559 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g0586 1 483 C2C2-Dof Transcription Factor Family AT3G47500 49.206 5.05e-127 375
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lele18g0586 zf-Dof 2.5e-32 No_clan