Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g1041 ATGGGTTTTTCTTCTCTGCATGTCTGCATGGAATCATCAGATCACTGGCTCCAGGGCACAATTTACGAGGAATCTGGATTGGATTCATCTTCAGCATCAGCAGGAGACATGCTTTCATGCTCCAGGCCGTTGATAGAGAGGAGGCTAAGACCTCCACATGATCAAGCCCTGATCAAGTGCCCTAGGTGTGACTCCACACACACCAAGTTCTGCTACTACAACAATTACAGCCTCTCTCAGCCAAGGTACTTCTGCAAAACTTGCAGAAGGTACTGGACCAAAGGTGGTACCCTCAGGAACATCCCTGTTGGTGGTGGTTGCAGAAAGAACAAGAAAGTCTCTAACAAGAAATCCAATAATAATAATGACCCATCACATAATAATATTCAAAACCAACCATTATCATCACAGCCTGCTGTAGGAATAGCCACCTCTTATCATCACAACCCTAAAGACCATCATCTTCAACTTTCTTTCCCAGATGCTCAGTTTTCTCACATCGATAACTTACTGGGAAATCCTAATTTCATGCTTGAGAACCCTAGGCCTATTGACTTCATGGAGAGTAAGTTGGGAGGGATAATTGGGAGTGCTTCTTCTAGGAACTTCCATTTTCTGGGAAATGGTGACAATATGGGCATGGGAATTGGGGTTGGAGACATTAATGGTCATCATCATCACAATGGGTTGCCGCCAAATTTTCAGAGTCTTTGCTCTCCATCGGGATTTGTTGGGGGTATGCCATCTTTTGATGGTAATAACTGTAATAATATCATGGACTCTTCTTGCCAGAGCCTGATGCTGCCATGTGATCATGCCACTGAGGACCCAAATGCCACCATTGATGTGAAGCCAAACCCTAAGCTTCTGTCTCTTGAATGGCAGGACCAGGGTTGCTCGGATGCTGGAAAAGAGACGTCGTTTGGGTATTTTAACGGTCTAGGATCATCATGGACAGGCATGATCAACGGCTATGGTTCATCCACGACAAATCCTCTGTTAGTTTCTGCATTGACTTGGCAAAAGAGTGTGAACAAGAAACTTCAGAGTCCAATATCGACTGCCTGGTGGTTTTTGGCTGACTATGTGGTTATGGAAAAAAAATCAGAAGATCCGGTTGCGTTGTCGTTTAGCGCTCTGTTGCATACTATGTGCAAGTATTTTGAAGGCACAATAATATATGGAGATTATACTGTCAGGCATCAAAAGGGATTGGGAATCTCTATGTCTGCAGCAAGCTTCATGCTTCCAGGATCAATCTCTACTTTTGACGCTAAGGAAACTTCCTAG 1290 0.4411 MGFSSLHVCMESSDHWLQGTIYEESGLDSSSASAGDMLSCSRPLIERRLRPPHDQALIKCPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVSNKKSNNNNDPSHNNIQNQPLSSQPAVGIATSYHHNPKDHHLQLSFPDAQFSHIDNLLGNPNFMLENPRPIDFMESKLGGIIGSASSRNFHFLGNGDNMGMGIGVGDINGHHHHNGLPPNFQSLCSPSGFVGGMPSFDGNNCNNIMDSSCQSLMLPCDHATEDPNATIDVKPNPKLLSLEWQDQGCSDAGKETSFGYFNGLGSSWTGMINGYGSSTTNPLLVSALTWQKSVNKKLQSPISTAWWFLADYVVMEKKSEDPVALSFSALLHTMCKYFEGTIIYGDYTVRHQKGLGISMSAASFMLPGSISTFDAKETS 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g1041 429 Pfam Dof domain, zinc finger 57 112 IPR003851 GO:0003677|GO:0006355
Lele17g1041 429 ProSitePatterns Zinc finger Dof-type signature. 60 96 IPR003851 GO:0003677|GO:0006355
Lele17g1041 429 MobiDBLite consensus disorder prediction 107 135 - -
Lele17g1041 429 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 47 202 IPR045174 GO:0003700|GO:0006355
Lele17g1041 429 ProSiteProfiles Zinc finger Dof-type profile. 58 112 IPR003851 GO:0003677|GO:0006355
Lele17g1041 429 MobiDBLite consensus disorder prediction 117 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g1041 Lele-ChrLele17 21050421 21053394 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g1041 1 335 C2C2-Dof Transcription Factor Family AT5G62940 42.893 2.94e-53 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lele17g1041 zf-Dof 5.3e-33 No_clan