Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0943 ATGCAGGAATCTAGAGACCCTGCGATTAAACTCTTCGGCCAGAAGATTCCTCTGCCCGGTGACTGCGAGCTTCCTGCCGTCGCCGTCGCCGATGCTGAAGAATCTGAATCGCTAGGGTCCATGGAGGTGGACACGCAAGAAGGAGGAGACGGTGAGGATGGAGAACAAAAGAATTCAGACGAGGAGAAGGACGAAGATGACGAGGATCATTCAGCTGGAAACACTGCAGACAAAAAGAAAGAGGCTGAGGATAATCCAAACTCAGAAGAGACTCAGAGTCCAGACTCATCATTGGGTGAGGCTAGTGTGAACCCAAAAACTCCTTCCATAGATGAAGAGACTGCAAAATCACAAAGTGACAACTCAGAGAAGGAGAAAAATGATGCAGCCAACGCTCAGGAGAAAACCCTGAAGAAGCCAGATAAAATACTTCCATGTCCTCGCTGCAACAGCATGGACACCAAATTCTGTTATTACAACAACTACAACATCAATCAGCCTCGTTATTTCTGCAAAGCCTGCCAAAGATACTGGACTGCAGGTGGTACCATGAGGAATGTACCAGTAGGAGCAGGCCGGCGAAAGAATAAGAACTCTTCTTCCCATTATCGCCACATCAGCATTACAGAGGCTCTACAAGCAGCTAGACTTGATGCACCAAATGGAACTCATCTTCCTGCGTTGAAGGGAAATGGCAGAGTCCTGAGTTTTGGACTAGATGCACCTATTTGTGATTCTATGGCATCTGTCCTGAATCTTGCAGAGAAAAAGGCCCTAAATGGTGTGCGAAATGGCTTTCATAGCAAAGGTGCTGAAACTGGTGGCGATGACTGCTCAAGTGCATCTTCCATTACAGTTTCAAATTCTATGGAAGAAATTGGCAAGAATGTTCCCCAAGAATCATTGCTCACGACTAACGGTTTTTCTCCTCCTATCCCATGTCTTCCCGGGGTTCCCTGGCCTTATCCTTGGAATGCTCCAGTTCCTTCACCTCCTTTATGCCCTCCTGGATTTCCCTTGTCATTCTATCCTGCAGCCTTTTGGAACTGTGGTGTGCCAGGAAACTGGAATATGCCCTGGTTTCCCCCACACCCCTCTGCTCAACAAAACCACCCAATATCTCCTACCACTACCAGTAGTCCTAATTCAACATTAGGGAAGCATTCGAGGGACGGTGATGTGATCAGAACAGACAACTCACGGAAACAAGAAACATCAAAACCGAGAAATGGGCGTGTTTTGGTTCCTAAAACCTTGAGAATTGATGATCCAAGTGAAGCCGCAAAGAGTTCCATATGGGCAACTCTAGGAATCAAGAATGAATCAGCCAGTGGAGGAGGTATGTTTAAGGCCTTCCAATCAAAGAAGGATGAGAAGGATCATGCCGTTGAAACCTCACTGGTGTTGCGGGCTAACCCTGCAGCCTTATCTAGATCCCTTAACTTTCATGAGAACTCCTGA 1461 0.4695 MQESRDPAIKLFGQKIPLPGDCELPAVAVADAEESESLGSMEVDTQEGGDGEDGEQKNSDEEKDEDDEDHSAGNTADKKKEAEDNPNSEETQSPDSSLGEASVNPKTPSIDEETAKSQSDNSEKEKNDAANAQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNINQPRYFCKACQRYWTAGGTMRNVPVGAGRRKNKNSSSHYRHISITEALQAARLDAPNGTHLPALKGNGRVLSFGLDAPICDSMASVLNLAEKKALNGVRNGFHSKGAETGGDDCSSASSITVSNSMEEIGKNVPQESLLTTNGFSPPIPCLPGVPWPYPWNAPVPSPPLCPPGFPLSFYPAAFWNCGVPGNWNMPWFPPHPSAQQNHPISPTTTSSPNSTLGKHSRDGDVIRTDNSRKQETSKPRNGRVLVPKTLRIDDPSEAAKSSIWATLGIKNESASGGGMFKAFQSKKDEKDHAVETSLVLRANPAALSRSLNFHENS 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0943 486 Coils Coil 115 135 - -
Lele17g0943 486 ProSitePatterns Zinc finger Dof-type signature. 146 182 IPR003851 GO:0003677|GO:0006355
Lele17g0943 486 ProSiteProfiles Zinc finger Dof-type profile. 144 198 IPR003851 GO:0003677|GO:0006355
Lele17g0943 486 MobiDBLite consensus disorder prediction 89 115 - -
Lele17g0943 486 MobiDBLite consensus disorder prediction 46 68 - -
Lele17g0943 486 MobiDBLite consensus disorder prediction 1 143 - -
Lele17g0943 486 PANTHER CYCLIC DOF FACTOR 2 1 486 IPR045174 GO:0003700|GO:0006355
Lele17g0943 486 MobiDBLite consensus disorder prediction 116 142 - -
Lele17g0943 486 MobiDBLite consensus disorder prediction 69 87 - -
Lele17g0943 486 Pfam Dof domain, zinc finger 141 198 IPR003851 GO:0003677|GO:0006355
Lele17g0943 486 MobiDBLite consensus disorder prediction 389 408 - -
Lele17g0943 486 MobiDBLite consensus disorder prediction 370 387 - -
Lele17g0943 486 MobiDBLite consensus disorder prediction 366 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0943 Lele-ChrLele17 20446773 20449357 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g0943 1 484 C2C2-Dof Transcription Factor Family AT3G47500 48.016 2.74e-124 368
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lele17g0943 zf-Dof 2.5e-32 No_clan