Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0935 ATGCTCTTCTCCGTACTGTTTTCGGTGTCGGTGGTTCTCCGAGACCCCCCTTCAGATGGCGTTGTCGAAGCATCTACATCTGTTGTATTTCAAGCTAAACAGAGTGAAGGTTTGAACAAAGATTTCTCTGATTATATTGAGTTGCCAAGAGATGAACTCCTGGGTGGCCTTCTTGCTGCTGGGTTTGATGAAAGATCTTGTCTCAGCAGGTATAAATCAAGCATATATGGCAAAGGACTAGCAGGAAAACCTTCTTCTTATCTGGTTTCTAGGTTAAGAAAATATGAAGCTCTCCACAAAGAATGTGGACCTTATACTGAATCCTATAACAAAACAGTGAAAGATCTCAGCTCTGGTCATTTTTCTGGGTCCTCGGTCTGTAAATATGTAGTTTGGATTTCATTTAGTGGGTTAGGGAATAGAATATTGACCTTAGCTTCTGTATTTCTTTACGCTCTACTCACAAACCGTGTCCTACTAGTCGATCCTGGAGTTGATATGAGAGATCTCTTTTGTGAACCATTTCCTGATGTTTCCTGGTTTCTGCCTCCCAATTTCCCCCTGTCGACCGAAATGCACACTCTTAATCAGCAATCTGCTCAATGTTATGGGAAGATGCTGACAGACAATTCAATTTCAAATTCCACAGTGCCATCTCATGTCTACCTTCATCTAGCCCATGATTATGATGATCAAGATAAGCTATTCTTCTGCGACGAAGACCAAAGTTATCTCCAGAAAGTACCCTGGTTAATCATGAAAACAGACAATTACTTCATCCCATCTCTATACTTAATGCCTTCTTTTGAGCAGGAACTGTATGATCTCTTTCCAAAGAAGGATACAGTCTTCCATTTCTTGGGTAGATACCTATTCCACCCCACCAACATGGTATGGGGACTTATTACCGGGTACTATGAAGCTTATTTAGCTAAAGCTGATGAAAGATTAGGAATCCAGATTAGAGTGTTTGACACAGAGCCAGGCCCATTTCAACATGTATTGGATCAAATCTTATCCTGTACTTTGAAAGAGAATCTTTTGCCCGATGTAAAGAGACATCATCAAGATACTGTAAGTTCGTCATCGGAAAAGCGAAAGTCAAAAGCAGTACTGATGACATCTTTAAGCTCAGGATATTTTGAAAAGGTAAGGGACATGTATTGGGAGTATCCTACAGTTACAGGAGAGGTGGTTGGAATATACCAACCAAGCCATGAAGGGTATCAGCAAACAGAGAAGCAAATGCACAATCAGAAAGCTTGGGCTGAAATGTATCTGCTGAGCTTAACCGATGTGCTGGTTAATAGCTCATGGTCAACTTTTGGGTATGTGGCTCAAGGCCTTGGAGGCTTGAAGCCATGGATACTGTACAAGCCGGAGAATCGAACAGCCCCGGATCCTGCATGCCGACGTGCCATGTCAATGGAGCCGTGCTTCCATGCTCCTCCCTTCTATGACTGCAAGGCCAAGAGAGGAACTGACACAGGTGATCTTGTTCCACACGTAAGGTACTGTGAGGATATGAGTTGGGGTCTGAAGCTTGTTGACAGTTAA 1557 0.4265 MLFSVLFSVSVVLRDPPSDGVVEASTSVVFQAKQSEGLNKDFSDYIELPRDELLGGLLAAGFDERSCLSRYKSSIYGKGLAGKPSSYLVSRLRKYEALHKECGPYTESYNKTVKDLSSGHFSGSSVCKYVVWISFSGLGNRILTLASVFLYALLTNRVLLVDPGVDMRDLFCEPFPDVSWFLPPNFPLSTEMHTLNQQSAQCYGKMLTDNSISNSTVPSHVYLHLAHDYDDQDKLFFCDEDQSYLQKVPWLIMKTDNYFIPSLYLMPSFEQELYDLFPKKDTVFHFLGRYLFHPTNMVWGLITGYYEAYLAKADERLGIQIRVFDTEPGPFQHVLDQILSCTLKENLLPDVKRHHQDTVSSSSEKRKSKAVLMTSLSSGYFEKVRDMYWEYPTVTGEVVGIYQPSHEGYQQTEKQMHNQKAWAEMYLLSLTDVLVNSSWSTFGYVAQGLGGLKPWILYKPENRTAPDPACRRAMSMEPCFHAPPFYDCKAKRGTDTGDLVPHVRYCEDMSWGLKLVDS 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0935 518 FunFam Galactoside 2-alpha-L-fucosyltransferase 125 176 - -
Lele17g0935 518 Pfam Xyloglucan fucosyltransferase 29 489 IPR004938 GO:0008107|GO:0016020|GO:0042546
Lele17g0935 518 Gene3D - 124 244 - -
Lele17g0935 518 PANTHER FUCOSYLTRANSFERASE 2-RELATED 5 517 IPR004938 GO:0008107|GO:0016020|GO:0042546
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0935 Lele-ChrLele17 20398517 20401110 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g0935 1 516 Xyloglucan Fucosyltransferase1 AT2G03220 64.038 0.0 693
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele17g0935 17 20398517 20401110 Lele19g0623 19 3609760 3612483 hybridization
Lele17g0935 17 20398517 20401110 Lele20g0827 20 14963804 14966604 hybridization