Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0873 ATGCAGGAAATACATTCTATCGGGGGTGGTAGATTTTTCGACGGCGGTGGTGGTGGAGCTGGAGGCGGAGAGAAGAGGCCGCACCACCACCAGAACCAGCAGGCCTTGAAGTGCCCCAGGTGTGACTCCCTCAACACCAAGTTCTGCTACTACAACAATTACAACCTCTCCCAACCCCGCCATTTCTGCAAGAGCTGCCGTCGGTACTGGACCAAAGGTGGCGTCCTCCGCAACGTCCCCGTCGGAGGAGGATGCCGTAAATCCAAGCGCTCGGAGCCTAAAGCCTCTCCCTCTTCAGAACCTCAACCCACGCCGACCCGAGCCCCAGCACCGCCGCTGCCGCAAGATAATCTTAAGTCGAGCTCTCATTCCAGCAGCGAAAGCTCCAGCCTCGCCGCCGCCGCAGCCACTGAAGCGTTATCGGCGCCTTCGTCTTCGAACCGTGAGCTGCTCACTAGTCAAACTTCGAAACCTAATTTGGAGTCTGGATTGATGGAGCAGGGAGGGGACTGCGGTATTTTCTCGGAGATAGGGAGCTTCACTAGCCTGATCACTACCACAAACGAAGCATTGTCGTTCGGATTCGGGAATATTCCGGAGCCGACGTCATTTCGGTTCGGTGGCACTACCCAACTAGAAGGGATGGCCGGGAACGAGTTATTATCGGGGGAGTGGCAGCAGGCACAGCAGAAAGAGACGGGGATGGGTGACATGATTTCTCAGCAGGAGTTGAAGTTGCCGGAGATCATGCCGGGGACGTTACTCGATCCGACGGTGCCGTTGGATTTGTCGGCGTTGCAGAGTAAGAACGAGAACGGTGGTTTCGGATCGTTGGATTGGCAAGGGGTCACGGACCAAGGTTTGTTCGATCTGCCTAACACCGTCGATCATTCTTACTGGAGTCACACTCACTGGACCGATCAAGAAAATCCCAGTCTCTTTCATCTTCCATGA 954 0.5556 MQEIHSIGGGRFFDGGGGGAGGGEKRPHHHQNQQALKCPRCDSLNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGVLRNVPVGGGCRKSKRSEPKASPSSEPQPTPTRAPAPPLPQDNLKSSSHSSSESSSLAAAAATEALSAPSSSNRELLTSQTSKPNLESGLMEQGGDCGIFSEIGSFTSLITTTNEALSFGFGNIPEPTSFRFGGTTQLEGMAGNELLSGEWQQAQQKETGMGDMISQQELKLPEIMPGTLLDPTVPLDLSALQSKNENGGFGSLDWQGVTDQGLFDLPNTVDHSYWSHTHWTDQENPSLFHLP 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0873 317 ProSitePatterns Zinc finger Dof-type signature. 38 74 IPR003851 GO:0003677|GO:0006355
Lele17g0873 317 MobiDBLite consensus disorder prediction 115 162 - -
Lele17g0873 317 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 27 214 IPR045174 GO:0003700|GO:0006355
Lele17g0873 317 ProSiteProfiles Zinc finger Dof-type profile. 36 90 IPR003851 GO:0003677|GO:0006355
Lele17g0873 317 MobiDBLite consensus disorder prediction 98 112 - -
Lele17g0873 317 Pfam Dof domain, zinc finger 34 90 IPR003851 GO:0003677|GO:0006355
Lele17g0873 317 MobiDBLite consensus disorder prediction 1 31 - -
Lele17g0873 317 MobiDBLite consensus disorder prediction 81 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0873 Lele-ChrLele17 19996980 19997933 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g0873 24 314 C2C2-Dof Transcription Factor Family AT5G60850 43.408 9.57e-54 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lele17g0873 zf-Dof 2.4e-33 No_clan