Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1734 ATGGGTTCCGGTGGTGGGAGGACGACGACGACAATGGAGAAACCTTCAGCTCAGGAGCTTCAGCAGCAGCAGCAACAATCTCTCAATTGCCCTCGTTGTGATTCAACCAACACTAAGTTCTGCTACTACAACAACTATAGCTTGTCTCAGCCGAGGCACTTCTGCAAATCTTGCAAGCGATATTGGACCAGAGGAGGCACTTTGAGAAATGTTCCTGTTGGAGGTGGGTGTAGGAAGAACAAGCGCTTGAAGCGACAAACGCCTTCTGCTGCTGATCACACTCCTTCATCTTCTTCTTCTTCTCCTAGTGCTGCTAATTCAAACCTTCCTTCTCAACCCCACATCAATAATCATGTTATTCCTCTGTTTTATGGGTTACCTGGTAACTCTAATTCTGAAATGAATCTTCCATTTCCAAGGTTCAGTTCTGGTTACGATCATCTGAATGCCCTGGGATCGGGTTTTTCATCTGGGTACTCTTCAAACGATTCACTTTTTTCAAATTACAGTTCCTTGTTTGGTAGTTCGATCTTATGCGGTTCTTCAACTGCCATATCTTCCCTCCTAGGCCATAGTACAAATCTGCAGCAACAGAGGTTCATGAATGGAGGAGGTGTGAAGGATTATGTTCTAGGAACTGGCACTTTCCAGGGCTTAGACCCACTAGAAGAGGTGAAAGTCGATGAAGAAAGACCCAAGCCGGTCATGGAACATGGGACCTTGTTCGATTACTATTCACCTTATTATTGGAATGATCAAGCTAGTAATGTTGGCACTTCAGTCACTTCCATGATCGAGTAA 801 0.4482 MGSGGGRTTTTMEKPSAQELQQQQQQSLNCPRCDSTNTKFCYYNNYSLSQPRHFCKSCKRYWTRGGTLRNVPVGGGCRKNKRLKRQTPSAADHTPSSSSSSPSAANSNLPSQPHINNHVIPLFYGLPGNSNSEMNLPFPRFSSGYDHLNALGSGFSSGYSSNDSLFSNYSSLFGSSILCGSSTAISSLLGHSTNLQQQRFMNGGGVKDYVLGTGTFQGLDPLEEVKVDEERPKPVMEHGTLFDYYSPYYWNDQASNVGTSVTSMIE 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1734 266 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 16 159 IPR045174 GO:0003700|GO:0006355
Lele16g1734 266 MobiDBLite consensus disorder prediction 73 111 - -
Lele16g1734 266 MobiDBLite consensus disorder prediction 1 23 - -
Lele16g1734 266 Pfam Dof domain, zinc finger 26 82 IPR003851 GO:0003677|GO:0006355
Lele16g1734 266 ProSitePatterns Zinc finger Dof-type signature. 30 66 IPR003851 GO:0003677|GO:0006355
Lele16g1734 266 MobiDBLite consensus disorder prediction 89 111 - -
Lele16g1734 266 ProSiteProfiles Zinc finger Dof-type profile. 28 82 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1734 Lele-ChrLele16 10091411 10092211 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1734 9 93 C2C2-Dof Transcription Factor Family AT5G60200 63.043 6.68e-35 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lele16g1734 zf-Dof 1.6e-33 No_clan