Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1384 ATGCGGGGATTGCGGGGTGGTCACGTGGTGTCACGTGTCTACGAAACTAATGGCGTTGTTGGTTTTTGGTACAATGGGCAGGGCAGGACGCAGCCAATTAACAGGAAGAAAAAGAAAAGGAACAAAGAGTCCAACACGATGAGGGATGAGGAAGAGCAAGAAACCGAGAAGGACGCTTTGGGAGAGAATCCAGATGAGACTATGGAGGATAGAGCCCCCACTGAATCTACAGAAGAGGTCACTAATCAGGATGCAGCCTCAAGGACGAGTGAAGAATCGACTACACCCCCTACTGAGAAGGACGCTACTACGTTGAAGGTTTCAAAATCTGAAGAAGAGCAGAGTGAGACAAGTAATTCACAAGAGAAGACTTTGAAAAAGCCAGACAAAATACTGCCTTGTCCCCGCTGTAATAGCATGGACACGAAGTTCTGCTACTACAATAATTACAATGTCAACCAACCCCGTCACTTCTGCAAGAACTGCCAGAGATACTGGACTGCTGGTGGAACTATGAGGAACGTGCCTGTGGGTGCTGGTCGTCGAAAGAACAAGAATTCTTCTCACTATCGCCAAATAACTGTTGCTGAAGCTCTCCAGGCTGCTCAAACAGACATGCCAAGTGGAGCACATCATCCTGCCCTGAAGCCCAATGGCACAGTCCTTGTCTTTGGGTCTGATGCACCTTTGTGTGAGTCAATGGCATCTGTCTTGAACCTTGCTGATAAAACAACGCAAGACTGCACAAGAAATGGATTTCATAGGCCCGAAGAACTAAGAATTCCTATTCCCTATGCCAGTGGAGAGAAAGGAGATGATCATTCTAATAAATCTCCCATGATGTCAACAAAGCCGATGGATGCTACAAGCATCAACAGGCAACAAGAACAAGCAATGCAGAACTGTCAGAGTTTCCCACCTCAAGTTCCTTACTATCCCGGGGCACCTTGGCCTTTCCCATGGAATCCGGTGCAGTGGAGCTCTCCGGTACCATCGCCCGCGTTTTGCCCTCCAGGATTTACCGTGCCATTCTATCCTGCCGCTGCATATTGGGGTTTTACTGTCTCAGGTGCTTGGAACATGCCATGGCTACCACCACCACCATCACCGAACAGCACGGGCCCTAATTCTGGCCCTAAATCGCCGACCCTGGGTAAACATTCAAGAGAAGAAAATATACTCAAGACAAATGATTCAGGGGGAGAAGATGAACGTTGTAAAGAAAATGGAAAAGAGAAGTGCCTTTGGGTTCCTAAAACTTTGAGGATTGATGACCCGGGAGAAGCAGCGAAAAGCTCTATATGGACAACTCTGGGCATTAAGAATGATAAGGCTGAGTCAGTTCAAGAGGGAGGACTTTTTAGGGCATTCCCATCAAAGGGCGACGGAAGAGATCGTTCAACACAAAACTCAACAGTGTTGCAGGCCAATCCAGCGGCATTGTCTAGGTCACTCAACTTTCATGAGGCCTCATAA 1476 0.4776 MRGLRGGHVVSRVYETNGVVGFWYNGQGRTQPINRKKKKRNKESNTMRDEEEQETEKDALGENPDETMEDRAPTESTEEVTNQDAASRTSEESTTPPTEKDATTLKVSKSEEEQSETSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKNSSHYRQITVAEALQAAQTDMPSGAHHPALKPNGTVLVFGSDAPLCESMASVLNLADKTTQDCTRNGFHRPEELRIPIPYASGEKGDDHSNKSPMMSTKPMDATSINRQQEQAMQNCQSFPPQVPYYPGAPWPFPWNPVQWSSPVPSPAFCPPGFTVPFYPAAAYWGFTVSGAWNMPWLPPPPSPNSTGPNSGPKSPTLGKHSREENILKTNDSGGEDERCKENGKEKCLWVPKTLRIDDPGEAAKSSIWTTLGIKNDKAESVQEGGLFRAFPSKGDGRDRSTQNSTVLQANPAALSRSLNFHEAS 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1384 491 MobiDBLite consensus disorder prediction 78 103 - -
Lele15g1384 491 MobiDBLite consensus disorder prediction 384 409 - -
Lele15g1384 491 ProSitePatterns Zinc finger Dof-type signature. 134 170 IPR003851 GO:0003677|GO:0006355
Lele15g1384 491 PANTHER CYCLIC DOF FACTOR 2 63 490 IPR045174 GO:0003700|GO:0006355
Lele15g1384 491 ProSiteProfiles Zinc finger Dof-type profile. 132 186 IPR003851 GO:0003677|GO:0006355
Lele15g1384 491 Coils Coil 33 54 - -
Lele15g1384 491 MobiDBLite consensus disorder prediction 366 409 - -
Lele15g1384 491 MobiDBLite consensus disorder prediction 104 130 - -
Lele15g1384 491 MobiDBLite consensus disorder prediction 264 283 - -
Lele15g1384 491 MobiDBLite consensus disorder prediction 43 77 - -
Lele15g1384 491 Pfam Dof domain, zinc finger 129 186 IPR003851 GO:0003677|GO:0006355
Lele15g1384 491 MobiDBLite consensus disorder prediction 22 132 - -
Lele15g1384 491 MobiDBLite consensus disorder prediction 463 491 - -
Lele15g1384 491 MobiDBLite consensus disorder prediction 451 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1384 Lele-ChrLele15 8050505 8054927 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g1384 93 491 C2C2-Dof Transcription Factor Family AT5G39660 50.600 3.57e-106 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lele15g1384 zf-Dof 3e-32 No_clan