Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1061 ATGAGCTGTCCTGGAGAGATGTCTCACAAGGATCCGGCTATCAAGCTATTTGGCAGGAAGATTCCCTTGCCGGAATGTCAGATTCCGGTGACCTCCCCAATGCCTCCTCAGATTCCGGCCAACTCCGGAACCATGGATGCTTGCAGTAGCCTGAAGAACACAGAAGTGGAAAAAGTTTGTGCAGAAAACTCTCAGCAACAAGATAATACCTCTGATTTAGCGGCAAGTAAAGAAGGGTCCCAACATAATCAGCTAGAATATGAGCCCAAAGCCAATCCCAAGACTATGGAGAATAGAGCGGAAACTAGCAGCACAGATCAAGATAAATCATTCAAGAAACCAGACAAGATTCTTCAGTGTCCACGATGCAACAGTTTGGACACAAAGTTTTGTTATTTCAATAACTACAATGTCAATCAGCCTCGACATTTCTGCAAGAACTGCCAAAGGTATTGGACTGCTGGTGGAACGATGAGGAATGTCCCGGTGGGTGCCGGGAGACGAAAGAACAAGCACTTAGCCTCTCAGTTTCGCCACATCATAGTGTCCTCTGATGGAATTTCAACCTCTAGGTTGGAGACCACAGACTCATCTAGTCACCAACTTATCTCATCTCCTGAATCTTCAGCTGCTTTCAGGTCTTCAATCGCAATGGATAATGGTATCGTATTGAAATTCGGTCCAGATGCCCCTCCTCTCTGTGAATCCATGGAGACAATGCTTACTATTAGAGACCAGAAAAGGAAAGTTGATGCAGAAAATGGGAAAGAACCATCTTTATGTGGATCTTCAGTAGCAAATAGTAGTGTTGCAGAACTTGTCATGCAAAAGGAGCAGTTTGTTTCTAATCAGCTTAGCACATCAAATCAGATGCAATGTTACCCTGTTCCTCCACTGCTGTTTCCCTGGAATCCAGATTTGAACAATGTTGTTTCTATGGCCGCAATTCATCAATCTTCAGCGCCAATGCAGTGGTATCCTACACCGTTGGTGGCAGTTCCTGGCATGTGCCCACCCGGCATTCCTTTACAATATGCACCACCATCATATTGGTCTGGTGGCACGGGGACAATCTCAATAGGGTCTAATGGTTGCCTTTCGCCGTCATCATCAACGAGTAATAGTTGCTGCTCAGGCAATGGCTCTCCAACTTTGGGAAAACACTCTAGAGATACGGTCTTTGCAGATGAAGAGAAGTCAGAGAAGTGTGTTCTGGTTCCAAAGACTCTTAGGATTGGTGATCCAAATGAAGCTTCAAAAAGTCCCATATGGACTACATTAGGTATAAAGCCTGACAAGAAGGAGTCTGAATCATCAAAGGAATTGGAAGCTGAAGGAGATGGAAAAGACCGTGTGTTGGGTGTTTCTCAAATTTTGGTAGCTAACCCAGCTGCTAACTCTAGGGCGCATGCATTCCAGGAGAGCATACAATGA 1434 0.4505 MSCPGEMSHKDPAIKLFGRKIPLPECQIPVTSPMPPQIPANSGTMDACSSLKNTEVEKVCAENSQQQDNTSDLAASKEGSQHNQLEYEPKANPKTMENRAETSSTDQDKSFKKPDKILQCPRCNSLDTKFCYFNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKHLASQFRHIIVSSDGISTSRLETTDSSSHQLISSPESSAAFRSSIAMDNGIVLKFGPDAPPLCESMETMLTIRDQKRKVDAENGKEPSLCGSSVANSSVAELVMQKEQFVSNQLSTSNQMQCYPVPPLLFPWNPDLNNVVSMAAIHQSSAPMQWYPTPLVAVPGMCPPGIPLQYAPPSYWSGGTGTISIGSNGCLSPSSSTSNSCCSGNGSPTLGKHSRDTVFADEEKSEKCVLVPKTLRIGDPNEASKSPIWTTLGIKPDKKESESSKELEAEGDGKDRVLGVSQILVANPAANSRAHAFQESIQ 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1061 477 MobiDBLite consensus disorder prediction 60 113 - -
Lele15g1061 477 MobiDBLite consensus disorder prediction 60 88 - -
Lele15g1061 477 Pfam Dof domain, zinc finger 115 172 IPR003851 GO:0003677|GO:0006355
Lele15g1061 477 ProSiteProfiles Zinc finger Dof-type profile. 118 172 IPR003851 GO:0003677|GO:0006355
Lele15g1061 477 PANTHER CYCLIC DOF FACTOR 2 9 475 IPR045174 GO:0003700|GO:0006355
Lele15g1061 477 ProSitePatterns Zinc finger Dof-type signature. 120 156 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1061 Lele-ChrLele15 6156791 6159114 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g1061 7 476 C2C2-Dof Transcription Factor Family AT3G47500 37.450 4.33e-70 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lele15g1061 zf-Dof 2.7e-32 No_clan