Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0812 ATGGGGCTGGTCGGGGCTACTTGTCTACTTGCAAAAGGGGCTTTACCTTCTCCGCTTCAAGATAATAAGAAGAGTGCTTTACTATCAGAAAATGTGAAAGAGGTTAGAGATGTAAAGATTGCCTGCAAGCTAGGTGATCGATCCACCAGTGATGTAGTTGTGAGGTTACGCACACAGGATGGTCGAGATGATTGGCTTTACAGCCACACAAAGATTCTTACAGAAAAATGCAAGTATTTTGCGGACAGGCTGTCCGATAACTGGCCAACATGTCAAATCATTGATTCACGCAGCTGTATCGATGTTTTCTGCCAAGAATCAGATTTTGATTACCATGTGAATCTTATACGCCTTCTCTATGTTGTCATAGATGGTTCTGTTGATGACTTGTGGCATGGTGTTAGAAATGCCCTTGGCATTCTTCAGGTTGCTGTTGAGCTCGGATGCCCCGAAATCATTACTGCTTGTGTTAACTACATAGAAGCAGTTGCATGGGAAGAGTCTGAGGAGGAGGAGATTTTAAGAATCGTACCTCGACTGGGATTACAGGCTGAGCCTATCCTAGCTAGACTTCAACCAGTCAACCAGTCAGCAATTTTAAGCATTTTTGTCTCTGCGATTTGCTTTACCACATCATCTCCTCCACCATCATTGAATGATATTAAATCTTCAGCTCAGGAGCAACTTGAATACATGCTAACTGAAGATGACGATGCCCCTCTTTTGACAGCTGGCGATAACATAAAATATGAGGTGAAAGAATGTGTAAATAAACTTTTTGCCAGGTTTAACAACTCATTGGCAGTTTTGTTATGTGATTCCACAGAGCCACTTTCTGAGGCAAGGAATATTCAGTTGTTACAATCCTATTTGACCGATTTATCATGGGCTTGTCAGATACTAAATAAGTTGGAAATAATGAGGGAATTTGTGGAGAGTTGGTTTGATGCATCTGAAAAGATAGTGAAGGTGCTTGAGCTAGGGATTTTAACAACCGAAATCATTGAGATAAAGTTGCGAGCTATAGAGGTGACATCAAAGGTTCTAGAGGCAATTGGTTATGGAACTGTAATATTGCCAACTGCCAAACGCCTTGAGATTGTGAATGTGTGGCTTCCGTTTGTGAGGATTACTAAACCTATGATTGACTCTGTAACTATGAATAGTGATAATGCTCTGGCACTCAAATTCGATGGTGAACTGTGGCAATCCCTTGAATCAACTTTTGTTTCTATCATTCTGGCATTGCCATCAGGGGACCAGGCTGAGGTTTTAACCGAATGGTTAGCAAACGACAATGTTCGGTATCCAGACCTGACAGAAGCGTTTGAAGTATGGTGTTACAGATCCAAGGTTGCAAAGAGAAGACTATCTTTGCTAGGAGATGAGCATGGCCTTTGCTTCCCAAATCACCCTCATCCCCACCAATATGATCATGCCACGTATGCAAAACACCGACATCCTGTATACAGGGCTGTGACATACACCTGGCCAACTTACCCTCATGCATCGTCATGTGCTTATGGTTTGGAAGCAGTAGACATTTCCAAGATTGTCTCTCATATCATATGCAGGCAGAAAGTAGAGGAAGCAATCATCATGGAGAGTAGTGGGTGGAAGCCTAATGTAGAGATATCACCAAACTGTCCCAGGTGTGGCTCTTGCAACACCAAGTTCTGCTACTACAATAACTACAGCTTAACTCAACCTCGCTACTTCTGCAGAGGCTGCAGAAGGTACTGGACCAAAGGAGGATCACTCCGCAATGTTCCCGTAGGCGGTGGCTGCCGGAAGAACGGACGTGGCAGCAAGACCTCCTTCAGACAATCATCATCCATGGATGCTCCTCCTCCCAAGATTTCACCTCATGGAGATAATTGCAATCCCGCGATAAATCCATCTTCATGTGGCTCCTCAGGTGTGCCTGATGCTCCAAATATTGATCTTGCACTCGTTTATGCGAATTTCCTGAATCAAAAGCCAGATTCATCAAGAGGACCAAGCGCAGAAGTTTGTTTGCCATCAGAAGAGGACCAACTTGGAGTAAGTGGGTGTTTGACAGAATCCCAATTGAGTGAGAGTAACCAAATGTACCTGTATGGGTTGAAATCTATGCAGAAAAATCAGAAAGATCATGGAATTGATCAGCGTTGTAGTAGTAGCAGTAGTCATGAATATGCTATGAATTTCGAGTTGCCGCCATTGCCAGGTGAAGATCAGGCGGCCTTGCATGATATGATGTGGTCCAATTCTGGCTTGGATACCTCGCAGCTCCCTCTTTTTGGTGCTGATGCTCATGATACCGACTTCTTTTTGGATAATTGGAGTCACTTCGATTTATCCAGGCCCTGA 2352 0.4366 MGLVGATCLLAKGALPSPLQDNKKSALLSENVKEVRDVKIACKLGDRSTSDVVVRLRTQDGRDDWLYSHTKILTEKCKYFADRLSDNWPTCQIIDSRSCIDVFCQESDFDYHVNLIRLLYVVIDGSVDDLWHGVRNALGILQVAVELGCPEIITACVNYIEAVAWEESEEEEILRIVPRLGLQAEPILARLQPVNQSAILSIFVSAICFTTSSPPPSLNDIKSSAQEQLEYMLTEDDDAPLLTAGDNIKYEVKECVNKLFARFNNSLAVLLCDSTEPLSEARNIQLLQSYLTDLSWACQILNKLEIMREFVESWFDASEKIVKVLELGILTTEIIEIKLRAIEVTSKVLEAIGYGTVILPTAKRLEIVNVWLPFVRITKPMIDSVTMNSDNALALKFDGELWQSLESTFVSIILALPSGDQAEVLTEWLANDNVRYPDLTEAFEVWCYRSKVAKRRLSLLGDEHGLCFPNHPHPHQYDHATYAKHRHPVYRAVTYTWPTYPHASSCAYGLEAVDISKIVSHIICRQKVEEAIIMESSGWKPNVEISPNCPRCGSCNTKFCYYNNYSLTQPRYFCRGCRRYWTKGGSLRNVPVGGGCRKNGRGSKTSFRQSSSMDAPPPKISPHGDNCNPAINPSSCGSSGVPDAPNIDLALVYANFLNQKPDSSRGPSAEVCLPSEEDQLGVSGCLTESQLSESNQMYLYGLKSMQKNQKDHGIDQRCSSSSSHEYAMNFELPPLPGEDQAALHDMMWSNSGLDTSQLPLFGADAHDTDFFLDNWSHFDLSRP 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0812 783 Pfam Dof domain, zinc finger 548 599 IPR003851 GO:0003677|GO:0006355
Lele15g0812 783 Gene3D Potassium Channel Kv1.1; Chain A 40 182 IPR011333 -
Lele15g0812 783 ProSiteProfiles Zinc finger Dof-type profile. 547 601 IPR003851 GO:0003677|GO:0006355
Lele15g0812 783 ProSitePatterns Zinc finger Dof-type signature. 549 585 IPR003851 GO:0003677|GO:0006355
Lele15g0812 783 MobiDBLite consensus disorder prediction 593 618 - -
Lele15g0812 783 ProSiteProfiles 4Fe-4S ferredoxin-type iron-sulfur binding domain profile. 539 570 IPR017896 -
Lele15g0812 783 MobiDBLite consensus disorder prediction 602 616 - -
Lele15g0812 783 PANTHER OSJNBA0011J08.25 PROTEIN-RELATED 41 459 IPR038920 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0812 Lele-ChrLele15 4682787 4687524 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g0812 526 781 C2C2-Dof Transcription Factor Family AT3G52440 38.380 4.19e-43 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lele15g0812 zf-Dof 2.1e-29 No_clan