Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g0673 ATGTTGGGTAACTGTGAGAAAATGGTGGTCATCCCCCCAACTAATAACCAATGGCTACAGATTGGTGATCAAACTCAAAAGATCTCGCCCATGGGTTCTGGTGGTGGGAGGACGACGACGACAATGGAGAAACCTTCAGCTGAGGAGCTTCAGCAGCAGCAGCAACAATCCCTCAAGTGTCCTCGTTGTGATTCAACGAACACTAAGTTCTGCTACTACAACAACTATAGCTTGTCTCAGCCGAGGCACTTCTGCAAATCTTGCAAGCGATATTGGACCAGAGGAGGCACTCTGAGAAATGTTCCTGTTGGAGGTGGGTGTAGGAAGAACAAGCGCGTGAAGAGACAAACGCCTTTCGCTGCGGATCACACTACTTCATCTTCTTCTTCTTCTCCTAGTGCTGCTAATTCAAACCTTCCTTCTCAACCCCACACCAATAATCATGTTAGTCCTCTGTTTTATGGGTTACCTGGTAACTCTAATTCTGATATGATTCTTCCATTTCCAAGGTTCAGTTCTGGCTACGATCAGCTTAATGCCCTGGGATTGGGTTTTTCATCTGGGTACTCTTCAAACGATTCACTTTTTTCGAATTACAGTTCCTTGTTTGGTAGTTCGATCTTCTGCGGTTCTTCAACTGCCATTTCTTCCCTCCTAGGCCATAGTACAAATCTGCAGCAACAGAAGTTCATGAATGGAGGAGGTGTGAAGGATGATGTTCTAGGAACTGGCACTTTCCAGGGCTTAGACCCACTAGAAGAGGTGAAAGTCGATGAAGAAAGACCCAACCAGGTCTTGGAACAAGGGAGCTTGTTCGATTACTATTCACCTTATTATTGGAGTGATCAAACTAATAATGTTGGTACTTCAGTCACTTCCATGATCGACCTATTGTTTTATGTGTCCAAGGTTGTTGAGAACATTGCTCTGAGAGGAAACTCGTATCCTCTTGTCTCTCATCGTCGTCGCGTCACAGTGTTCCCCATGGAGAGAGATATATGGATCATCGAAAGTGGAAGCATGGTTCCTTCTCATAGTGCAACTTGA 1047 0.4508 MLGNCEKMVVIPPTNNQWLQIGDQTQKISPMGSGGGRTTTTMEKPSAEELQQQQQQSLKCPRCDSTNTKFCYYNNYSLSQPRHFCKSCKRYWTRGGTLRNVPVGGGCRKNKRVKRQTPFAADHTTSSSSSSPSAANSNLPSQPHTNNHVSPLFYGLPGNSNSDMILPFPRFSSGYDQLNALGLGFSSGYSSNDSLFSNYSSLFGSSIFCGSSTAISSLLGHSTNLQQQKFMNGGGVKDDVLGTGTFQGLDPLEEVKVDEERPNQVLEQGSLFDYYSPYYWSDQTNNVGTSVTSMIDLLFYVSKVVENIALRGNSYPLVSHRRRVTVFPMERDIWIIESGSMVPSHSAT 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g0673 348 MobiDBLite consensus disorder prediction 26 47 - -
Lele14g0673 348 Pfam Dof domain, zinc finger 56 112 IPR003851 GO:0003677|GO:0006355
Lele14g0673 348 ProSitePatterns Zinc finger Dof-type signature. 60 96 IPR003851 GO:0003677|GO:0006355
Lele14g0673 348 ProSiteProfiles Zinc finger Dof-type profile. 58 112 IPR003851 GO:0003677|GO:0006355
Lele14g0673 348 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 44 206 IPR045174 GO:0003700|GO:0006355
Lele14g0673 348 MobiDBLite consensus disorder prediction 103 153 - -
Lele14g0673 348 MobiDBLite consensus disorder prediction 119 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g0673 Lele-ChrLele14 18047240 18048714 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g0673 58 295 C2C2-Dof Transcription Factor Family AT1G28310 40.604 3.84e-39 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lele14g0673 zf-Dof 2.2e-33 No_clan