Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g0625 ATGGGTTTGAGTTCTAAGCAGGTTTCTAGTAGTGGGATTGATTGGAACCAGACGTTGCTGAAAGATCAGAAGTTGGAGCTTCCGAAGCCTCCTCCATTGATGAGGAAACTGCAACAACAACCACAACAACAGAATCAGCAGCAACAGATGCAGCAACAACGACAGCAATTGTCGTCGTCGGAGCCTTTGAAGTGTCCGAGGTGTGATTCGATCAACACCAAGTTCTGTTACTACAACAATTACAACAAGTCTCAGCCTCGCCATTTCTGCAGAACCTGCAAGAGGCACTGGACTAAAGGTGGCACCTTGCGCAATGTCCCCGTTGGCGGTGGCCGGAAAAACAAACGGGTCAAGAAATCATCATCCACCCCCATCTCTTCCTCCTCCTCCTCCTCCGCCGCCGCCGCGACCTCCGGCATGATAATTCATAGTTCCCTGCAAAGGCCGAGTAGTAATCTTCTTCTTCCTCTTCCTCCATCATCATCTGCCTCTCTCTTTCAGTCTCTGATTCTTCCTCCTCCATCACAATCCTCCTTGCTTCTTCCTCTTCAGAATCTGAATAACCCCAGAGACTCATCACAAAGTAAAGATTTTGGAATTGGGACCCCCACCAACTTCTTGACTTCGACGACAACTCTGCCTCTTCTTCCTCATCAAAATCAGAGCTTTATCTTCCCTTTCTCAAGCTCGAGCTCTTTTGAGACTAACCCATGTTCTGTTTCAACCTCTCTGAGATCCTCAAGTGTTTACAATAATAATAACAACTACGGCCAAGAGTTGAAGACAACAATGAAAGAGCCAACCCCAACAACGCAGACACAGACACAGCCATGGGAGATACCTTCGACAAGCGTAGGAGGCAATACGGAAATGTCAAACTACTGGACTTGGGAGGACCTCGATTCGTTAGTCTCAACTGATCTCAATGTTCCCTGGGATGATTCTGATATAAAACCCTGA 960 0.4729 MGLSSKQVSSSGIDWNQTLLKDQKLELPKPPPLMRKLQQQPQQQNQQQQMQQQRQQLSSSEPLKCPRCDSINTKFCYYNNYNKSQPRHFCRTCKRHWTKGGTLRNVPVGGGRKNKRVKKSSSTPISSSSSSSAAAATSGMIIHSSLQRPSSNLLLPLPPSSSASLFQSLILPPPSQSSLLLPLQNLNNPRDSSQSKDFGIGTPTNFLTSTTTLPLLPHQNQSFIFPFSSSSSFETNPCSVSTSLRSSSVYNNNNNYGQELKTTMKEPTPTTQTQTQPWEIPSTSVGGNTEMSNYWTWEDLDSLVSTDLNVPWDDSDIKP 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g0625 319 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 40 266 IPR045174 GO:0003700|GO:0006355
Lele14g0625 319 Pfam Dof domain, zinc finger 62 115 IPR003851 GO:0003677|GO:0006355
Lele14g0625 319 ProSiteProfiles Zinc finger Dof-type profile. 63 117 IPR003851 GO:0003677|GO:0006355
Lele14g0625 319 MobiDBLite consensus disorder prediction 101 133 - -
Lele14g0625 319 MobiDBLite consensus disorder prediction 266 287 - -
Lele14g0625 319 MobiDBLite consensus disorder prediction 21 63 - -
Lele14g0625 319 MobiDBLite consensus disorder prediction 36 63 - -
Lele14g0625 319 ProSitePatterns Zinc finger Dof-type signature. 65 101 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g0625 Lele-ChrLele14 17674188 17675147 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g0625 51 134 C2C2-Dof Transcription Factor Family AT1G51700 60.714 1.30e-30 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lele14g0625 zf-Dof 2.3e-31 No_clan