Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1606 ATGAAGGTGAAACCCAATGGAAAGTGGCTTCTACCTTTGCAAATGAGAAACAGAGCCCCCTCCAATCATTGTAGGAATGGTTCAAGAGAAACATGTGCTAGTAAGTACCGAGCAAAGATTTCATTTTTCTTAAGTTGCAAGAAAGAAGGGATCAGATGTCAAAGATATCTTACTCTTTCCTACTCAGCAGCTGTAACATACAGGATTTGTAGCTATGGCCTTTGCTTCCCAAATCACCCTCATCCCCACCAATATGATCATGCCACGTACGCAAAACACCGACATCCTGTATACAGAGCTGTGACACACACCTGGCCAACTTACCCTGATGCATCGTCATGTGCTTATGGCTTGGAAGCAGTAGACATTTCCAAGATTGACTCTCATATCATATGCAGGCAGAAAGTAGAGGAAGCAATCATCATGGAGAGTAGTGGGTGGAAGCCTAATGTAGAGATATCACCAAACTGTCCCAGGTGTGGCTCTTGCAACACCAAGTTCTGCTACTACAATAACTACAGCTTAACTCAACCTCGCTACTTCTGCAGAGGCTGCAGAAGGTACTGGACCAAAGGAGGATCACTCCGCAATGTTCCCGTCGGCGGTGGCTACCGGAAGAACAGACGTGGCAGCAAGACCTCCTTCAGACGATCATTATCCATGGATGCTCCTCCTCCCAAGATTTCACCTCATGGAGATAATTGCAATCTCGCGATAAATCCATCTTCATGTGGCTCCTCAGGTGTGCCTGATGCTCCAAATATTGATCTTGCACTCGTTTATGCGAATTTCCTGAATCAAAAGCCAGATTCATCAAGAGGACCATGCGCAGAAGTTTGTTTGCCATCAGAAGAGGACCAACTTGGAGTAAGTGGGTGTTTGACAGAATCCCAATTGAGTGAGAGTAACCAAATGTACCTGTATGGATTGAAATCTATGCAGAAAAATCAGGAAGATCATGGAATTGATCAGCGTTGTAGTAGTACCAGTAGTCATGAATATGCTATGAATTTTGAGTTGCCGCCATTGCCAGGTGAAGATCAGGCGGCCTTGCATGATATGATGTGGTCCAATTCAGGCTTGGACTCCTCGCAGCTCCCTCTTTTTGGTGCTGATTCTCATGATGCCGACTTCTTATTGGATAATTGGAGCCACTTCGATTTATCCAGGCCCTGA 1176 0.4532 MKVKPNGKWLLPLQMRNRAPSNHCRNGSRETCASKYRAKISFFLSCKKEGIRCQRYLTLSYSAAVTYRICSYGLCFPNHPHPHQYDHATYAKHRHPVYRAVTHTWPTYPDASSCAYGLEAVDISKIDSHIICRQKVEEAIIMESSGWKPNVEISPNCPRCGSCNTKFCYYNNYSLTQPRYFCRGCRRYWTKGGSLRNVPVGGGYRKNRRGSKTSFRRSLSMDAPPPKISPHGDNCNLAINPSSCGSSGVPDAPNIDLALVYANFLNQKPDSSRGPCAEVCLPSEEDQLGVSGCLTESQLSESNQMYLYGLKSMQKNQEDHGIDQRCSSTSSHEYAMNFELPPLPGEDQAALHDMMWSNSGLDSSQLPLFGADSHDADFLLDNWSHFDLSRP 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1606 391 ProSiteProfiles 4Fe-4S ferredoxin-type iron-sulfur binding domain profile. 147 178 IPR017896 -
Lele13g1606 391 MobiDBLite consensus disorder prediction 200 223 - -
Lele13g1606 391 ProSitePatterns Zinc finger Dof-type signature. 157 193 IPR003851 GO:0003677|GO:0006355
Lele13g1606 391 Pfam Dof domain, zinc finger 156 209 IPR003851 GO:0003677|GO:0006355
Lele13g1606 391 ProSiteProfiles Zinc finger Dof-type profile. 155 209 IPR003851 GO:0003677|GO:0006355
Lele13g1606 391 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 148 324 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1606 Lele-ChrLele13 25035679 25037138 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g1606 133 389 C2C2-Dof Transcription Factor Family AT3G52440 40.143 7.60e-45 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lele13g1606 zf-Dof 1.1e-29 No_clan