Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1082 ATGTCGGAAGCAAAAGACCCCGCCATCAAGCTCTTCGGGAAGACGATCCCGCTGCCGGAGCTCCCCGCCAGATCCGGAGGCTCGGCCGGAGCTCTATCTTCTTCTTCTGGGGATATTGCTGATGATGGTATTTATCACAATCGTGCTTCTCCCACCCACTCATCGCGAGAGTCCAACACGAAGAGGGATGAGGAAGAGCAAGAAACCGAGAAGGACACTTTGGGAGAGAATCCAGATGAGAATATGGAGGATGGAGCCCCCACTCAATCTACAGAAGAGGTCACAAATCAGGATGCAGCCTCAAGGACGGGTGAAGAATCGACTACACCCCCTACTGAGAAGGACGCTACTAAGTTGAAGGTGTCAAAATCTGAAGAAGAGCAGAGCGAGACAAGTAATTCACAAGAGAAGACTTTGAAAAAACCAGACAAGATACTGCCTTGTCCCCGCTGCAATAGCATGGACACCAAGTTCTGCTACTACAATAATTACAATGTCAACCAACCCCGTCACTTCTGCAAGAACTGCCAGAGATACTGGACTGCTGGTGGAACTATGAGGAATGTGCCTGTGGGTGCTGGTCGTCGAAAGAACAAGAATTCTTCTCACTATCGCCAAATAACTGTCGCTGAAGCTCTCCAGACTGCTCGAACAGACATGCCAAGTGGAGTACATCATCCTGCCCTGAAGCCCAATGGCACAGTCCTTGTCTTTGGGTCTGATGCACCTTTGTGTGAGTCAATGGCATCTGTCTTGAACCTTGCTGATAAAACAATGCAAGACTGCACAAGAAATGGATTTCATAGGCCCGAAGAACTAAGAATTCCTAGTCCCTATGCCAGTGGAGAGAAAGGAGATGATCATTCTAATAAATTTCCCGTTATGTCAACAAAGCCGATGGATGCTACAAGCATCAACTGGCAACAAGAACAAGCAATGCAGGACTGTCAGAGTTTCCCACCTCAAGTTCCTTACTATCCCGGGGCACCTTGGCCTTTCCCATGGAATCCGGTGCAGTGGAGCTCTCCGGTACCACCGCCCGTGTTTTGCCCTCCAGGATATACCATGCCATGCTATCCTGCAGCTGCATATTGGGGTTGTACTGTCTCAGGTGCTTGGAACATGCCATGGCTACCACAACCATCATCACCGAACAGCATGGGCCCTAATTCTGGCCCTAAATCGCCGACCCTGGGTAAACATTCAAGAGAAGAAAATATACTCAAGATAAATAACTCAGGGGGAGAAGATGACCGTTGTAAAGAAAATGGAAAAGAGAAGTGCCTTTGGGTTCCTAAAACTTTGAGGATTGATGACCCGGGAGAAGCGGCAAAAAGCTCTATATGGACAACTCTGGGCATTAAGAATGATAAGGCTGAGTCAATGCAAGAGGGAGGACTCTTTAGGGCATTCCCATCAAAGGGCGACGGAAGAGATCATTCAACACAAAACTTAACGGTGTTGCGGGCCAATCCAGCGGCATTGTCTAGGTCACTCAACTTTCATGAGGCCTCATAA 1518 0.4855 MSEAKDPAIKLFGKTIPLPELPARSGGSAGALSSSSGDIADDGIYHNRASPTHSSRESNTKRDEEEQETEKDTLGENPDENMEDGAPTQSTEEVTNQDAASRTGEESTTPPTEKDATKLKVSKSEEEQSETSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKNSSHYRQITVAEALQTARTDMPSGVHHPALKPNGTVLVFGSDAPLCESMASVLNLADKTMQDCTRNGFHRPEELRIPSPYASGEKGDDHSNKFPVMSTKPMDATSINWQQEQAMQDCQSFPPQVPYYPGAPWPFPWNPVQWSSPVPPPVFCPPGYTMPCYPAAAYWGCTVSGAWNMPWLPQPSSPNSMGPNSGPKSPTLGKHSREENILKINNSGGEDDRCKENGKEKCLWVPKTLRIDDPGEAAKSSIWTTLGIKNDKAESMQEGGLFRAFPSKGDGRDHSTQNLTVLRANPAALSRSLNFHEAS 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1082 505 MobiDBLite consensus disorder prediction 55 78 - -
Lele13g1082 505 PANTHER CYCLIC DOF FACTOR 2 1 504 IPR045174 GO:0003700|GO:0006355
Lele13g1082 505 Pfam Dof domain, zinc finger 143 200 IPR003851 GO:0003677|GO:0006355
Lele13g1082 505 MobiDBLite consensus disorder prediction 1 144 - -
Lele13g1082 505 MobiDBLite consensus disorder prediction 108 144 - -
Lele13g1082 505 MobiDBLite consensus disorder prediction 269 291 - -
Lele13g1082 505 MobiDBLite consensus disorder prediction 383 402 - -
Lele13g1082 505 MobiDBLite consensus disorder prediction 383 397 - -
Lele13g1082 505 ProSiteProfiles Zinc finger Dof-type profile. 146 200 IPR003851 GO:0003677|GO:0006355
Lele13g1082 505 MobiDBLite consensus disorder prediction 83 107 - -
Lele13g1082 505 ProSitePatterns Zinc finger Dof-type signature. 148 184 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1082 Lele-ChrLele13 21669694 21672499 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g1082 6 505 C2C2-Dof Transcription Factor Family AT5G39660 45.472 2.29e-112 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lele13g1082 zf-Dof 3.2e-32 No_clan