Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0783 ATGTTGGGTAACTGTGAGAAAATGGTGGTCATCCCCCCAACGAATAACGAATGGCCACAGATAGCTGATCAAACACAGAAGATCTCTCCCATGGGTTCCGGTGGCAGGACGACGACGACAATAATGGAGAAATCTTCAGCTCAGGAGCTTCAGCAGCAGCAACAATCTCTCAAGTGTCCTCGTTGTGATTCAACCAACACCAAGTTCTGCTACTATAACAACTATAGCTTGTCTCAGCCAAGGCACTTCTGCAAATCTTGCAAGCGATATTGGACCAGAGGAGGCACTCTGAGAAATGTTCCTGTTGGAGGTGGGTGCAGGAAGAACAAGCGCGTGAAGCGCCAAACACCTTCTGCTTCTGATCACACTCCTTCATCATCATCTTCTTCTCCCAGTGCTGCTAATTCAAACCTTCCTTCTCAACCCCACATGGATAATCATGTCAATCCTTTGTTTTATGGGTTACCCAGTAACTCTAATTCTTATATGAATCTTCCATTTCCAAGGTCCAGTTCTGCGTACGATCATCTGAATGCTCTGGGATTTGGTTTTTCCTCTGGGTACTCTTCAAACGATTCACTTTGTTCAACTTACAGTTCCTTGTTTGGTCATTCGATCTTCGGTAGTTCTTCAACTGCCATATCTTCCCTCCTAAGCCCCAGTACAAATCTGCAGCAACAGAAGTTCATGAATGGAGGTGGGAAGGATGATGTTCTAGGAACTAGCAGTTTCCAGGGCTTAGAACCACTAGAAGAGGTGAAAGTGGATGAAGAAAGACCCAACCAGATCATGGAACATGGGAGCTTGTTCGATTACTATTCACCTTATTATTTGAATGATCAAACTAATAATGTTGGTCCTTCAGTCACTTCCATGATCGAGTGA 885 0.4452 MLGNCEKMVVIPPTNNEWPQIADQTQKISPMGSGGRTTTTIMEKSSAQELQQQQQSLKCPRCDSTNTKFCYYNNYSLSQPRHFCKSCKRYWTRGGTLRNVPVGGGCRKNKRVKRQTPSASDHTPSSSSSSPSAANSNLPSQPHMDNHVNPLFYGLPSNSNSYMNLPFPRSSSAYDHLNALGFGFSSGYSSNDSLCSTYSSLFGHSIFGSSSTAISSLLSPSTNLQQQKFMNGGGKDDVLGTSSFQGLEPLEEVKVDEERPNQIMEHGSLFDYYSPYYLNDQTNNVGPSVTSMIE 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0783 294 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 44 209 IPR045174 GO:0003700|GO:0006355
Lele13g0783 294 MobiDBLite consensus disorder prediction 101 150 - -
Lele13g0783 294 Pfam Dof domain, zinc finger 55 111 IPR003851 GO:0003677|GO:0006355
Lele13g0783 294 ProSitePatterns Zinc finger Dof-type signature. 59 95 IPR003851 GO:0003677|GO:0006355
Lele13g0783 294 ProSiteProfiles Zinc finger Dof-type profile. 57 111 IPR003851 GO:0003677|GO:0006355
Lele13g0783 294 MobiDBLite consensus disorder prediction 118 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0783 Lele-ChrLele13 19693541 19694582 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g0783 1 293 C2C2-Dof Transcription Factor Family AT1G28310 37.288 8.42e-40 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lele13g0783 zf-Dof 1.7e-33 No_clan