Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0077 ATGGCGGATCGAGCCCGGCTAGCGAAGATGCCGCTTCTGGAGGCAGCTCTAAATTGTCCTCGCTGTGAATCTACCAACACAAAATTCTGCTACTTTAACAACTACAGCTTGTCTCAACCCAGGCACTTCTGCAAGACCTGCAGGCGTTACTGGACAAGAGGCGGAGCTCTCAGGAACGTTCCGGTCGGCGGAGGATGCCGCAGAAACAAGAAGACCAAGAGAAGCCGCTCCAAGTCTCCGGCAGCATCTGACAAACAGCCACCGTCCGACCCCACAGGCGGGGCCGCCATAGCAACCGAGCTGATCGGTCAATTGCCGTCGGCGTCCTTACAGGATCTGAGTCGCTATGGAGTGGGAAGCATGGGCCTCGGCTTGCAAGGACAGATTGATCACATGTTTCCCATTGGACTTAATGGAAGCAATATTCCAAGCGGAGGACTGGATCAGTGGCGGTTAAAGCAGTTTCCTTTCTTGAATAATGGTTTTCATCAGTCACGTTCAGCTGTTTCTGCTTCTGCTTCAAACCCATTTCAAATCGAAGTTGGGAGTTCTAGGGTTACACAAATGCCTCCAGTTAAAATGGAAGATAATAATGGAGCCTTAAATTTGTCTAGGTCATCGCAAGCTTCGAATATATCAGAAAATAACAACCAATGCTATTCATGGATTCCTACCACAGATATTATATCAGGCCTTGTTGCCTCTTCTTCCACGACACATGTCTTGTAA 729 0.4897 MADRARLAKMPLLEAALNCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKKTKRSRSKSPAASDKQPPSDPTGGAAIATELIGQLPSASLQDLSRYGVGSMGLGLQGQIDHMFPIGLNGSNIPSGGLDQWRLKQFPFLNNGFHQSRSAVSASASNPFQIEVGSSRVTQMPPVKMEDNNGALNLSRSSQASNISENNNQCYSWIPTTDIISGLVASSSTTHVL 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0077 242 ProSiteProfiles Zinc finger Dof-type profile. 17 71 IPR003851 GO:0003677|GO:0006355
Lele12g0077 242 Pfam Dof domain, zinc finger 16 71 IPR003851 GO:0003677|GO:0006355
Lele12g0077 242 MobiDBLite consensus disorder prediction 62 95 - -
Lele12g0077 242 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 14 161 IPR045174 GO:0003700|GO:0006355
Lele12g0077 242 ProSitePatterns Zinc finger Dof-type signature. 19 55 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0077 Lele-ChrLele12 660010 660738 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0077 1 241 C2C2-Dof Transcription Factor Family AT3G55370 43.431 1.10e-52 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lele12g0077 zf-Dof 1.3e-32 No_clan